Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00176 ATGGAAGTGACGCGTAGAAATTTTAAAGTCAAGTTTTCTATAGCAATAACAAGCATCCTGATATGTGTCCTGTGCTTCAACGCCCAGCACATCCATGGCCAAACATCAAATTATTTTGGCTCTCAGTGTTCAAACACAACTTTCAGTGCTGATAATCGTTCAAGGAGCGTATACATGTACAAGGCTAATATCAGAAATGTTCTTTCATCTCTATCTTATGGTGCTGGTAAAGGGCTTAAGTATCAAAACGCTACTGCAGGAAATGAGACCACAAACATGGTTTATGGACAGTACGATTGCCGAGCAGATGCGAAGACAATCTTCTGTCAATTCTGTGTCTACACAGCTGGAAATGACGTTGTCCAAAGGTGTCCCCACAGCGTTTCAGCTGTTATCTGGTACGATGTGTGCATTCTAAGGTTTTCCAATGAGAAATTCTTTGGGAATGTCACTACATCTCCCTCATGGCATTTGCTTGATAACCGGGGCATCTCCGATCTCGACGAGCCTAAGGAAGCTCAGAATTTCATGCATAGTTTGATAAGAACCGCAACAAGTACTCCATCTTTATTGTATGCAAGAGGTGGCTTCAATATGAGTGATGATGTTATGTTCTATGAGGTTGATGAATCACCCACACCTGTTCAAGGGAAAGGTTCTGCCAAGTCAAGAATCGTGATCATCACCATAGCAATTGCGGTAGCGGTAGTTCTACTGGGTTTAGGAGGATACAGCTTATGGAAGAGGAAGAGAAATCTCCAACGTGGACTGCAAACAGATACCATTGGCAGTTTGTCCAAAAAAAACAGTGCAAAGGAGGAGTCACTGGATACTGACCTTCCTCTCATCCCCTTAAGTGTGGTTCTAAATTGCACTGATCATTTCTCAGAAGAGTCTAAATTGGGGGAAGGCGGTTTTGGTCCTGTGTACAAGGGAATTTTAGAAGACGGAAGGCATGTTGCTGTGAAAAGACTATCGAGGACTTCTTCTCAAGGTGTACTAGAGTTCAAGAATGAAGTAGTTTTAATAGCTAAGTTGCAACACAGAAATCTCGTCAGACTAGTGGGATGCTGCATAGAGGGAGGTGAAAAACTACTTGCGTACGAGTACATGCACAATTCTAGCCTTGACTTTCATCTCTTTGGTAAGGCCAGAGGATCTGCATTAGATTGGAACACAAGATTCAACATCATTAATGGAATTGCTAAAGGGCTATTGTATCTCCATGAGGACTCAAGACTGAGAGTTATTCATAGAGATCTGAAAGCAAGCAACATCTTGCTAGATGATCAGATGAACGCAAAGATCTCTGACTTTGGTTTGGCAAGGACATTTGGAGGAGACCAAGGGGAGACAAACACAAGAAGAGCATGGTACTTGTGGTTGGAAGGTCAAGTTATACAGTTGATGGATCCTTTACTTGAAAAGTCATGTGACACAAGTCAAGTAATGAAGTGTGTTCAAATTGGTTTGCTGTGTGTTCAAGAAGACGCAGCAGACAGGCCAACTATGTCAACAGTTGTGTTCATGTTAGCTACAGATTCACCAGCCTTGCCCAAACCAATGAAGCCTGCATTCTCTGTTGGCAGACAAGCAATGGAACAGGGTTCCACATCAAGCAGTTCCAAGAACCGCTCCATCAATGATCTTACTCTTTCTAATGTTGCACCAAGGTAA 1677 0.4258 MEVTRRNFKVKFSIAITSILICVLCFNAQHIHGQTSNYFGSQCSNTTFSADNRSRSVYMYKANIRNVLSSLSYGAGKGLKYQNATAGNETTNMVYGQYDCRADAKTIFCQFCVYTAGNDVVQRCPHSVSAVIWYDVCILRFSNEKFFGNVTTSPSWHLLDNRGISDLDEPKEAQNFMHSLIRTATSTPSLLYARGGFNMSDDVMFYEVDESPTPVQGKGSAKSRIVIITIAIAVAVVLLGLGGYSLWKRKRNLQRGLQTDTIGSLSKKNSAKEESLDTDLPLIPLSVVLNCTDHFSEESKLGEGGFGPVYKGILEDGRHVAVKRLSRTSSQGVLEFKNEVVLIAKLQHRNLVRLVGCCIEGGEKLLAYEYMHNSSLDFHLFGKARGSALDWNTRFNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDDQMNAKISDFGLARTFGGDQGETNTRRAWYLWLEGQVIQLMDPLLEKSCDTSQVMKCVQIGLLCVQEDAADRPTMSTVVFMLATDSPALPKPMKPAFSVGRQAMEQGSTSSSSKNRSINDLTLSNVAPR* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00176 558 Gene3D Transferase(Phosphotransferase) domain 1 371 456 - -
Pte17g00176 558 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 456 553 - -
Pte17g00176 558 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
Pte17g00176 558 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 260 370 - -
Pte17g00176 558 Gene3D Transferase(Phosphotransferase) domain 1 457 523 - -
Pte17g00176 558 ProSiteProfiles Protein kinase domain profile. 295 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00176 558 MobiDBLite consensus disorder prediction 522 558 - -
Pte17g00176 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Pte17g00176 558 SMART serkin_6 295 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00176 558 SUPERFAMILY Protein kinase-like (PK-like) 281 540 IPR011009 -
Pte17g00176 558 Gene3D Phosphorylase Kinase; domain 1 257 370 - -
Pte17g00176 558 Pfam Salt stress response/antifungal 55 143 IPR002902 -
Pte17g00176 558 Pfam Protein kinase domain 296 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00176 558 FunFam Os07g0541700 protein 371 458 - -
Pte17g00176 558 Gene3D - 36 146 IPR038408 -
Pte17g00176 558 MobiDBLite consensus disorder prediction 531 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00176 Pte-Chr17 2251035 2253897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00176 65 559 Receptor kinase-like Gene Family AT4G23220 32.496 2.10e-88 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte17g00176 Pkinase 4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00176 - - gmx:100796972 523.857