Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00174 ATGTTGAGCAAGGTTCTGGTGCTACTTCTTCTGTCATTCACATTCAGTACTCCATTGGAAACTTGTCATGCTAATCACACCCATCACTCATCTGACATTCCTTGGCATGTCACCCATGTCCGAGTCAACAATTATCTTGGCATGGGGTTGAGCTACACAATTCATTGCAAATCCAAAGATGATGATTTGGGAGTTCATGTAATAGGGGATGGTCAATATTACGAATGGAGTTTTCGAGTGAATGTGGGTCGTACAACTCTATTTTGGTGTGGAGTCTATTGCAGTATTGGTTCAGGTGTTTATGAATTATTCAATGCAGAGAGAGACTTCTATCGATGTGACAGACATTGCAGATGGGATATAGTGAAGGAAGGTGTTTGTGGGTATAACACTGTAGAAGAGCCGACCACAAGAGATTTAGTTTTCCCATGGCTAAAACCAGATTATGATACTTTGGCTGTGATATATGAAGAAGAAAAGGAGAAGAGGATAACCCCATAA 501 0.4072 MLSKVLVLLLLSFTFSTPLETCHANHTHHSSDIPWHVTHVRVNNYLGMGLSYTIHCKSKDDDLGVHVIGDGQYYEWSFRVNVGRTTLFWCGVYCSIGSGVYELFNAERDFYRCDRHCRWDIVKEGVCGYNTVEEPTTRDLVFPWLKPDYDTLAVIYEEEKEKRITP* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00174 166 PANTHER - 36 130 IPR010264 -
Pte17g00174 166 Pfam Plant self-incompatibility protein S1 39 144 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00174 Pte-Chr17 2237190 2237690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00174 38 144 Carbohydrate Esterase AT3G16970 33.333 2.89e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00174 - - cic:CICLE_v10027477mg 109.768