Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00172 ATGGAGGGTGAGACTGCGAAGGGAAGGGTATGCGTCACAGGGGCAGGAGGGTTTCTCTCTTCATGGCTAGTCAAGCTTCTCCTATCAAGGGGATACACTGTCCATGGAACCTTACGGGAACCTGGAAGTACAAAGTATGCACATTTGAACAAACTTGAGAAAGCTTCTGAGAATCTTAAACTCTTCAAAGCTGATATCCTAGATTATAATGCTCTTCTTTCTGCAATTCAAGGATGTTCTGGGGTTTTTCATGTTGCTAGTCCTGTGCCATCTGCAGGTGTACCAAATCCTGAGGTGGAAGTACTTGAGCCTGCTGTGAAGGGCACATTGAATGTGCTTAAAGCTGGTATCGAAGCAAAAGTTCAACGGGTTGTCATCGTATCTTCTCAAGCAGCTGTATCCATGAACCCTCAATGGCCTAAGGATAAAGTAATGGATGAGACTTGCTGGTCGGATGAAGAGTACTGCAAACAAACTAATAATTGGTATTTCCTTTCCAAGACGAAAGCAGAAGCTGAGGCTTTCAAATTTGCCAAGAGCAATGGCCTTGACGTTGTCTCCGTCTGTCCAGCACTTGTCTTAGGTCCAATGCTACAGTCCACTGCCAATTCAAGTAGCATGGTTCTCATCAAACTTTTAAGAGAAGGCTATGAGTCATTGGAAAACAAGAACAGATGGACAGTAGATGTACGTGACGTAGCTGATGCATTGCTTTTAACTTATGAGAAGCCTGAGGCTGAGGGAAGATACATATGCACCGCATATCCCATCATGACAAAGGATTTGGTGGACATTCTCAGGAAAAGATATCCGGACTACGACTACCCCCAGAAGTATATTGAGGTGGAAGAAGGCATAAAGTTGAGCTCAGAGAAACTGCAAAGGTTGGGTTGGCGATTCAGGCCCTTGGAGGAGACAATAATTGAATCAGTCCAGAGTTACCAAGAAATTGGTCTCTTGAAATAA 966 0.442 MEGETAKGRVCVTGAGGFLSSWLVKLLLSRGYTVHGTLREPGSTKYAHLNKLEKASENLKLFKADILDYNALLSAIQGCSGVFHVASPVPSAGVPNPEVEVLEPAVKGTLNVLKAGIEAKVQRVVIVSSQAAVSMNPQWPKDKVMDETCWSDEEYCKQTNNWYFLSKTKAEAEAFKFAKSNGLDVVSVCPALVLGPMLQSTANSSSMVLIKLLREGYESLENKNRWTVDVRDVADALLLTYEKPEAEGRYICTAYPIMTKDLVDILRKRYPDYDYPQKYIEVEEGIKLSSEKLQRLGWRFRPLEETIIESVQSYQEIGLLK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00172 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 310 - -
Pte17g00172 321 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 321 - -
Pte17g00172 321 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
Pte17g00172 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 315 IPR036291 -
Pte17g00172 321 Gene3D - 3 321 - -
Pte17g00172 321 CDD FR_SDR_e 10 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00172 Pte-Chr17 2224797 2227088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00172 3 322 Monolignol Biosynthesis Gene Families AT2G33590 64.798 4.20e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00172 - - vvi:100242793 462.996