Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00137 ATGGCAGAACCTCGGGCCAAGCGCCCCAAAATCTTAAGAGGTGAAGATGACTATGTGCCTGGAAATATAATTGAGATTGAGCTTCATAACTTCATGACCTTTAGTCATTTGAAATGTAAACCTGGGCCACGGTTGAACCTTGTCATTGGGCCTAATGGATCTGGAAAGAGTTCTCTTGTATGCGCCATTGCACTTGGGCTTGGTGGTGAGCCTCAGCTGCTTGGGAGAGCAGCAAGTGTTGGCGCATATGTTAAACGCGGAGAGAATTCTGGTCATATCAATGTTACGTTGAGAGGGGAGACTAAAGAGCAGAAGATCACTATTATGAGGAGAATTGATACTCATAACAAGTCTGAATGGTTGTATAATGGAAAAGTGGTGCCTAAGAAGGATGTGGTAGAGATTGTCCAGAGCTTCAATATACAAGTTGGCAATCTCACACAATTTTTGCCACAAGACAGAGTTTGTGAGTTTGCCAAATTGACTCCTGTGCAACTTCTTGAAGAAACTGAAAAGGCTGTTGGTGATCCTCAGCTACCAGTACAACATCGTGCACTGGTTGAGAAATGCCGTGGATTGAAGCACATGGAGCTTGCTATTGAGAATAAAGAAGCAACGTTAAATCAGCTGAAGACACTTAATGCTGAACAAGAGAAGGATGTTGAACGAGTCCGTAAGAGGGAAGATCTTCTAGCAAAGGTTGAGACAATGAAAAAGAAACTACCATGGCTGTTGTATGACAAGAAGAAGACTGAGTATCTGGAAGCTAAGAAGCAGAAGGAAGATGCAAAAAGGAAATTAGATGAAGCTGCAAAGATTCTAGAAGAATTAAGCAAACCTATAGAGAAGCGGAAACAGGAGAAAGCTGTACTGGAAAATAAATCTAAAAAGATCACCAGCCACATAAATGCCAGCAGCAAGAAGCAAATGGATCTTTTGGAGAAAGAAAATGCTTTGGTTGCTCAATTGCAAGGAAAATACAAAACAGTGGAAGATCTAAAGAGGCAGGAAGAATCTCGTCAACTAAGACTTCTAAAAGCCAGAGAAGAGCTTGATGCTGCTAAAGCTGAACTCCAGAGTCTTCCAATGTTTGAATCTGCTAATGAGGATTTGGAACGGCTAAAAGATGGCATTTCTGAGATTGATTGTTCTGCAATGGAATTGAGAGGGAAAAAGTCAGATATGGATAAAGAATTAATGAGAGGGAAGAAACTTTTGTATGATTGCATCGACAGGTTGGCGAAGATGGATGATAAAAACACCAAATGCTTGCATATTTTACAAAATTCTATTGCTGAGAAGATCTTTGAAGCTTATCATTGGGTTCAAGAGCATCGCCATGAATTTAAGAAGGATGTCTATGGGCCAGTGTTGCTAGAGGTTAATGTCTCAAATCGTGTTCATGCTGGTTACCTGGAGGGTCAAACTGCTTCTTACATATGGAAGTCTTTCATAACTCAAGACCCTAGTGACCGGGATTTACTGGTGAAAAGCCTCAAACATTATGATGTACCAGTATTGAATTATACTGGTGGTGGTAACTGTCGACGAATGCCGTTTCATATATCTGAAGATATGCATGCACTTGGCATCTACTCCCGGCTTGACCAAGTTTTTGATGCTCCTGATGCAGTCAAGGAAGTTTTGATTGAACAGTTTGCTTTGGATCGATCTTATGTTGGATCCAAGGAAACTGATCAAAGAGCTGATGAGGTCCAGAGGTTGGGAATATCAGATTTGTGGACTCCAGATAGTCACTACCGTTGGAGTAAGTCTAGATATGGGGGACATATATCAGCTATGGTGGATTCAGTGGAGAGACCACGGCTTCTTTTCTACAATAATTCAGATGTGGGAGAAATTGAGAGACTAAAGTCGAAGAAACAGGAGCATGAAGTTCTTATCACCACTTTGGAGGGAAACATCAAGAGACTTAATGCTGAGATAAGCCACCTCGAGAATCAAGCTTCTGATCTTCGTAAACAGAGGATGGATATCATTGATAATATACAACGCGAGAAGGGAAAGCGCACGGAGATTAAAAATCGTATTGAACAAAGAAGAAGGAAACTAGAATCAATTGAGAAGGAGCCGGACCTTGATACACAAATGGCAAATGTCATGGATCAAGCTGCAGACTGTAACATTAAGCGTTTCAACAATGCAATAGAAATGAAGGATTTACTTGTTGAGATTGTTGCTTACAGACAGAGTTTTGCTGAGAATCACATGGCTTGCTTGGAGTATGATGCAAAGATTAGAGAGATGGAACTCAGTGTCAAGCAACAAGAGAAGTATGCTGTGCAAGCTTCTGCATATTTTAAAGATTGTGAGGAGGTGGCTGAGGATCGCCGGCAAAAACTTTCAGAAGCTAAGAGGCAAGCCGAGTCGATTGCCTCAATCACTCCTGAATTAGAAAGGGCATTTCTTGAGATGCCTACTACAGTCGAGGAACTGAATGCTGCTATTCAAGATACTATATCTGAAGCCAATTCTATTCTTTTCCTAAACCATAATATATTGGAGGAATATGAAAATCGTCGACGTCAGATAGAAGCTCTTGAAGCAAAACTTGAGGCAGATATAAAGGAACTACAGAGCTGTTTAGCTGAAATAGATAATCTAAAGGGGAAGTGGCTTCCAACTTTGAGAAACCTTGTTGGCCAGATAAATGAAACATTCAGTCGCAATTTTCGAGAGATGGCTGTTGCAGGAGAAGTTTCATTGGATGAGCATGATATGGACTTCGATCAGTTTGGGATACTGATAAAAGTGAAGTTTAGACAAGCTGGACAACTTCAAGTTCTCAGCGCCCACCATCAATCTGGAGGGGAAAGGTCAGTGTCAACAATTCTTTATCTTGTTTCTCTTCAAGATCTCACCCATTGCCCTTTTCGGGTAGTTGATGAAATAAACCAGGGGATGGATCCTATAAACGAGAGGAAGATGTTTCAGCAATTAGTAAGAGCTGCCAGCCAACCAAATACGCCACAGTGTTTCTTGCTCACCCCGAAGTTGCTACCTGATCTTCATTACAGTGAGGCATGTAGCATACTGAATGTAATGAATGGACCTTGGATTGATCAGCCTTCTAAAGTGTGGAGCACTGGAGATCGATGGGGATCCATCACGGGGTCATTGACACGAAGTCAGTGCTGA 3159 0.4153 MAEPRAKRPKILRGEDDYVPGNIIEIELHNFMTFSHLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRAASVGAYVKRGENSGHINVTLRGETKEQKITIMRRIDTHNKSEWLYNGKVVPKKDVVEIVQSFNIQVGNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVQHRALVEKCRGLKHMELAIENKEATLNQLKTLNAEQEKDVERVRKREDLLAKVETMKKKLPWLLYDKKKTEYLEAKKQKEDAKRKLDEAAKILEELSKPIEKRKQEKAVLENKSKKITSHINASSKKQMDLLEKENALVAQLQGKYKTVEDLKRQEESRQLRLLKAREELDAAKAELQSLPMFESANEDLERLKDGISEIDCSAMELRGKKSDMDKELMRGKKLLYDCIDRLAKMDDKNTKCLHILQNSIAEKIFEAYHWVQEHRHEFKKDVYGPVLLEVNVSNRVHAGYLEGQTASYIWKSFITQDPSDRDLLVKSLKHYDVPVLNYTGGGNCRRMPFHISEDMHALGIYSRLDQVFDAPDAVKEVLIEQFALDRSYVGSKETDQRADEVQRLGISDLWTPDSHYRWSKSRYGGHISAMVDSVERPRLLFYNNSDVGEIERLKSKKQEHEVLITTLEGNIKRLNAEISHLENQASDLRKQRMDIIDNIQREKGKRTEIKNRIEQRRRKLESIEKEPDLDTQMANVMDQAADCNIKRFNNAIEMKDLLVEIVAYRQSFAENHMACLEYDAKIREMELSVKQQEKYAVQASAYFKDCEEVAEDRRQKLSEAKRQAESIASITPELERAFLEMPTTVEELNAAIQDTISEANSILFLNHNILEEYENRRRQIEALEAKLEADIKELQSCLAEIDNLKGKWLPTLRNLVGQINETFSRNFREMAVAGEVSLDEHDMDFDQFGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLTHCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLHYSEACSILNVMNGPWIDQPSKVWSTGDRWGSITGSLTRSQC* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00137 1052 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 4 1047 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Pte17g00137 1052 Coils Coil 621 669 - -
Pte17g00137 1052 Gene3D - 22 226 IPR027417 -
Pte17g00137 1052 Gene3D - 843 1023 IPR027417 -
Pte17g00137 1052 Coils Coil 193 227 - -
Pte17g00137 1052 Coils Coil 774 798 - -
Pte17g00137 1052 Coils Coil 677 697 - -
Pte17g00137 1052 FunFam Structural maintenance of chromosomes 5 848 1019 - -
Pte17g00137 1052 Coils Coil 246 277 - -
Pte17g00137 1052 Pfam RecF/RecN/SMC N terminal domain 23 992 IPR003395 -
Pte17g00137 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 1003 IPR027417 -
Pte17g00137 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 995 IPR027417 -
Pte17g00137 1052 Coils Coil 313 350 - -
Pte17g00137 1052 Coils Coil 837 871 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00137 1 1052 Structural Maintenance of Chromosomes family AT5G15920 64.103 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00137 K22803 - qsa:O6P43_001392 1515.36