Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00124 ATGGATTCCAGAAGAGAGGGTTTGGAGGGAGCAATAGCCAAATCATATGATTCTGATGAGCTAGTTCAATGTACTAGGTCATCGAGTAGGGATGAATACCCCAGTTATGATTCAGAGAGGGACGACTACATGGATATTGATACTGAGCATGATAAAAATGGTAGCAGTCCTTCACCGTTGGTTACAGATCATGAGGATGATGATAACAGCCATGAAACTCCTGAACTTCCAACTCCTCCTCAGAGGACTGTTAACATGCTGCATGGATGTAGAAGTGTTGATGAGTTCGAGAGGCTTAATAAGATAGACGAGGGCACTTATGGTGTTGTATACAGAGCGAGAGATAAGAAGAATAGTGAGATTGTAGCATTGAAGAAGGTAAAAATGGAAAAGGAAAAGGAGGGTTTTCCTCTCACTTCTCTTCGGGAGATAAACATTCTTCTTTCTTTTCATCACCCTTCTATTGTGGATGTAAAGGAAGTTGTGGTTGGGAGTAGTCTTGACAGTATTTTTATGGTGATGGAATACATGGAACACGATCTCAAAGGACTGATGGAAACAATGAAGCAACCATTTAGTCAGAGTGAAGTGAAGTGCCTGATGCTTCAGCTTTTAGAAGGTATTAAATACCTCCATGACAATTGGGTGCTTCATCGGGATTTGAAGACTTGA 672 0.4107 MDSRREGLEGAIAKSYDSDELVQCTRSSSRDEYPSYDSERDDYMDIDTEHDKNGSSPSPLVTDHEDDDNSHETPELPTPPQRTVNMLHGCRSVDEFERLNKIDEGTYGVVYRARDKKNSEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00124 223 MobiDBLite consensus disorder prediction 32 52 - -
Pte17g00124 223 SMART serkin_6 96 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00124 223 PANTHER CELL DIVISION PROTEIN KINASE 94 223 - -
Pte17g00124 223 FunFam cyclin-dependent kinase G-2 isoform X1 81 178 - -
Pte17g00124 223 Gene3D Transferase(Phosphotransferase) domain 1 179 223 - -
Pte17g00124 223 Gene3D Phosphorylase Kinase; domain 1 81 178 - -
Pte17g00124 223 MobiDBLite consensus disorder prediction 1 82 - -
Pte17g00124 223 Coils Coil 114 134 - -
Pte17g00124 223 SUPERFAMILY Protein kinase-like (PK-like) 88 222 IPR011009 -
Pte17g00124 223 ProSiteProfiles Protein kinase domain profile. 96 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00124 223 Pfam Protein kinase domain 96 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00124 Pte-Chr17 1775677 1778277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00124 87 222 Core Cell Cycle Gene Families AT5G10270 47.333 2.95e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pte17g00124 Pkinase 3.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00124 K08818 - pop:7460029 351.673