Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00045 ATGGAAAGAATGTTCCCTCCCAAGAGGCCTTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGGGACTCGGGACTTGTTCTCACCACTGACCCAAAGCCAAGACTACGTTGGACTGTCGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGGCCCGACAAGGCCACACCTAAAACCATCATGAGAGTTATGGGTGTGAAGGGCCTTACACTTTACCACCTCAAGAGTCATCTGCAGAAATTTAGGCTAGGAAAGCAGCCCCACAAGGAATTCAATGATCACTCAATGAAGGATGGCATGAGAGCTTCAGCTTTAGAACTTCAGCGGAGCACTGCGCCTTCTGGGATGATAAGCCGCAACATGAATGAGATGCAAATGGAAGTGCAGAGAAGACTGCATGAACAGCTAGAGGTACAGAAACATCTTCAGTTGAGGATTGAAGCTCAAGGGAAATACATGCAGAGTATATTGGAGAAAGCTTGCGAAACCCTTGCTGGTGAAAACATGGCATCTGCTAGTTTCAAGGGTATAGGAACTCAAGGCATTCCTGATTTCGGTGTGATGAAAGATTACAATACACCACATGGCCTCACCTTTTCTTCTTTTCAAGACCTTAATATATATGGTGGGAGTGATCAACTTGCTCTCCATCATAACATGGAAAGACCTACACTTGATCACGGGTTTATGGCAAATACTGAAAGTATCTGTGTTGCTAAGAAGAGGCCTAACCCTTACAGTGGAAGTGGAAAGAGCCCTTTGATTTGGAATGATGATCTTAGGCTCCATCATGATTTGGGAACAACAATCGGTACACAGGATGATCAATTTAAAGGTGATCACATTCAAATTGCACCGCCTAGCTTGGACAGAGGCAGTGATATTGACTCAATAGAAGAGATTTATGAAGCAAAAGGAGCAGCAATCCCGGGTGATATTATGGGTGAAAGGAAGTTGGATGCATCAATGAAGCTTGAAAGGCCATCACCAAGGAGAGCGCCACTTCAAGCTGAGAGAATGAATCCAATGATTAACACTGGTGCTTTGCCACAAGGTAGAGCATCAACATTTGGGTGA 1095 0.4484 MERMFPPKRPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSMKDGMRASALELQRSTAPSGMISRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKACETLAGENMASASFKGIGTQGIPDFGVMKDYNTPHGLTFSSFQDLNIYGGSDQLALHHNMERPTLDHGFMANTESICVAKKRPNPYSGSGKSPLIWNDDLRLHHDLGTTIGTQDDQFKGDHIQIAPPSLDRGSDIDSIEEIYEAKGAAIPGDIMGERKLDASMKLERPSPRRAPLQAERMNPMINTGALPQGRASTFG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00045 364 MobiDBLite consensus disorder prediction 1 20 - -
Pte17g00045 364 Gene3D - 34 92 - -
Pte17g00045 364 Pfam MYB-CC type transfactor, LHEQLE motif 130 169 IPR025756 -
Pte17g00045 364 FunFam Myb family transcription factor 34 92 - -
Pte17g00045 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Pte17g00045 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 179 IPR044848 GO:0003700
Pte17g00045 364 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Pte17g00045 364 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Pte17g00045 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00045 Pte-Chr17 752038 754256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00045 4 365 G2-like Transcription Factor Family AT1G79430 56.806 9.36e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte17g00045 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00045 - - cave:132175254 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00045 17 752038 754256 Pte17g00045 17 752038 754256 RCT