Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00039 ATGGAATATGATGACGAGGGAGGTTCAGGTTCATCAATGAGTGATAGTGGCTGGAGTTATGATGTCTTTTTGAGTTTTGCAGGTAAAGACACTCGCTATGGTTTTACAGGTCATCTTTACGATGCCTTGTGTCGAAAAGGAATCAAGACCTTCATGGACACGATGATCAAGAGGGGAGATCAAATTTCACGCGCTCTTACCACCAAAATAGATGAGTCTAGGATTGCTGTTGTTGTTTTCTCTGAGAACTATGCGAAGTCCACTTGGTGTCTGGATGAGCTTGTCAAGATTGTTGAGTGTGTCAAGTCAAAGGGGCAATTGGTCAGATCAATCTTTTATCATGTCCAGCCATCAGATATACAACATGGTAGAAACAGTTTTGGAGATGCATTGACTGAACATGAAAAGAAGTTCAGCAAAGAGAAAGTTGCAAAATGGAGATCAGCTTTAACACAAGTTGCAACTGTATCTGGTTGGCATTTCCAGAACGGGTACGAGTACTTGTTCATAAGAGAGGTAACTAAAGAGATATACACCATACTGACAAGTACAGCTGTTCATGAAGGTAACTCACCAGTTGGTCTGGAGTCTCGCATGTTGGAAGTGAGATCTCTTCTGGAGATAAACTCTGATGACATTGTCAGCATGGTGGGGATATGCGGAATTGGTGGGATTGGAAAAACGACAATTGCGCGAGGTGTATATGATTCCCTTTCTGATCAATTTGAAGCCAAGTCCTTTCTTACCAATGTAAGAGAAAATTCGAGTCAAGGGTTAATATATCTGCAGAAGGTACTCCTTTCAGAGATGCTGGGAGATGGAGATGACAATATTCGCGACGTTAATCAAGGGATGTCTGTAATAAAGAACAGACTTAAACACAGAAAGATTCTTCTGGTTCTTGACGATGTGGATGAGCTGGAACAATTACGAGCTTTAGTTGGAGGGCTTGACTGGTTTGGAAATGGAAGTAGAATTATCATAACAACTAGAGACAAGCATTTGCTCACTTGTCATCGCATTGAAAATGATAAGATCCTTGAGGCTCGGGAATTGAATGATCGAGAAGCCCTTGAATTATTCAGTAGGGAAGCATTCAAGAGATTCAAACCTGATGCAAGTCATGCAAGAATTTACAAAAGGGTCGTAGCATACAGCAAGGGGGTTCCATTAGTTCTGAAAATCATAGGGGCTGATTTGTGTGGAAGGAGCATGGACAAATGGGGCAGTGTCTTGGATGAGTATGAAAGAGTTCCCAAGAGAAAAATTCATGATGTGCTTAAAATAAGTTATGATAGTTTGGAGCATAATGAAAAGGAACTTTTTCTTGACATTGCATGCTTCTTCAAAGGAAGTGAACTCAAAGATGTCAAGAACATACTACGTGATTGTGATTTCTTCACAGATATTGGTTTTGACAAACTCATTGACAAATCTCTTGTATCCTTTCAAGACAAGAAAATATGGATGCATGATCTCATACAGGAAATGGGCAGGAAAATTGTTCAACAGCAGTCAGCAGAGCCTAACCAGCGTTCTAGACTTTGGCATTACAAGGATGTTCATGAAGTACTCACTCGAAATATGGGAACAGACAAAATTCAAGGCATATTTCTACAGACTCCTCATGTAGTGGAATGGAATGGTGAGGCCTTCAAAGCGATGACGAATCTGCGAATACTAATAATCGAACAAGGGAAGTTTTCTACCGGTCCTAGCTACATCCCAAGCAGTTTGAGATTGCTACATTGGGTGGAATATCCTTCACCATGTTTGCCACTAGATTTTGAAGGCAAGAAGCTAGTGGTACTCAAACTGTTAGGGAGTTCCATCCAAAAGCTGCCACTCAAGAAATGCAAAAACTTGACAATCATAGATTTCAGAATGTGTCATTTGTTGAAGGAAATACCTGATGTCTCCGAACTGGCGAATCTAGCAGAGCTTCATGCTGATTACTGTGCCAGTTTGGAAAAAGTTCATGAGTCTGTTGGCCTTCTTGACAAACTAGTCAAGTTGAGTTTTAAAGGCTGCCGAAATATCACAAATTTCCCACATAAGCTGAGGTCCAAATTTCTTGAATCACTAGACATTTCCCATAACTACAAAATCACAAGGTTTCCAAATGTATCAGAAGTGATGGAAAGAATAAGATTCATTGATGTGGGAGGCACCTCTATGGAGAAATTACCGTCTTGCTTTGGAGATCTGGTTGGTCTTGAAGTTCTAAGAATACGTAATTCTCAATTCCTAAAACGAATACCAAGTACTTTTTTTGCTTTGCAAAATCTTAAGGAACTTGATGCAGAGAACTGTCCATTGATTCCAAAGGCCTTGAGGGCCTTAAAATTGAAGTCGATCTCGGCATCATCTGCATTGAACGATGAGGCCATCCACATAACAATGGTTCTCCCGAATTTGATCTCTTTGAATATGAGCCACTGTGATCTTATAGATGAAGATATTCCAGTACTTCTTAGTTGCTTTCCTCGATTGCGAAGCTTATTCATTTCAGGAAACAGATATCTGTCATGCCTCCCTGTGTGCTTCAAAGAATTTCTTTACATGGGGACACTTGACATTGCTTCTTGTAGAAAACTTCAACACATTTATGACATTCCACCAAATCTTTGGGACATTAATGCATCAGACTGCAGTCTGTTGACCGCTCAATCATCAAGTTTACTACTCTCTCAGGGATTACATAATGTTCCAAAGTTACAAGTAAGAGTTCGAGGAGAAAGAATTCCTGAGTGGATAAAAAATTGCTACAGAGGAGGAACACTGTCTTTTTATGTTCATGGTGGGAAATTCCCCATGTGTGCATTGTCCTTTATTACAAAGCAGGTTGGGTGTGACATAGAATTCAGCTTATCCATCAACGGGAGCAAAGTACTGAAAGGATCATCACGGCTGTTTGTTCAGGAATCAGAAAGTCATGTGTTGTTGTTTGATATGAGGGCAGCATTCAAATTTCAGCGAGACGACCTTGACGCACGTCTGAAACGAGATGAATGGAATCAAGTGGAGATTTCTTGTCTGCTCATCAAAGCGCATGCTGGCAGGAAAAGATACAATCCAGACTGGTGCGCAGCTCATTTATACAAGCAACAAGAACTAGATATAGAGAATGACATCCTTTTTGCAAGTCCATGCGATCCTAAAAATTGA 3168 0.404 MEYDDEGGSGSSMSDSGWSYDVFLSFAGKDTRYGFTGHLYDALCRKGIKTFMDTMIKRGDQISRALTTKIDESRIAVVVFSENYAKSTWCLDELVKIVECVKSKGQLVRSIFYHVQPSDIQHGRNSFGDALTEHEKKFSKEKVAKWRSALTQVATVSGWHFQNGYEYLFIREVTKEIYTILTSTAVHEGNSPVGLESRMLEVRSLLEINSDDIVSMVGICGIGGIGKTTIARGVYDSLSDQFEAKSFLTNVRENSSQGLIYLQKVLLSEMLGDGDDNIRDVNQGMSVIKNRLKHRKILLVLDDVDELEQLRALVGGLDWFGNGSRIIITTRDKHLLTCHRIENDKILEARELNDREALELFSREAFKRFKPDASHARIYKRVVAYSKGVPLVLKIIGADLCGRSMDKWGSVLDEYERVPKRKIHDVLKISYDSLEHNEKELFLDIACFFKGSELKDVKNILRDCDFFTDIGFDKLIDKSLVSFQDKKIWMHDLIQEMGRKIVQQQSAEPNQRSRLWHYKDVHEVLTRNMGTDKIQGIFLQTPHVVEWNGEAFKAMTNLRILIIEQGKFSTGPSYIPSSLRLLHWVEYPSPCLPLDFEGKKLVVLKLLGSSIQKLPLKKCKNLTIIDFRMCHLLKEIPDVSELANLAELHADYCASLEKVHESVGLLDKLVKLSFKGCRNITNFPHKLRSKFLESLDISHNYKITRFPNVSEVMERIRFIDVGGTSMEKLPSCFGDLVGLEVLRIRNSQFLKRIPSTFFALQNLKELDAENCPLIPKALRALKLKSISASSALNDEAIHITMVLPNLISLNMSHCDLIDEDIPVLLSCFPRLRSLFISGNRYLSCLPVCFKEFLYMGTLDIASCRKLQHIYDIPPNLWDINASDCSLLTAQSSSLLLSQGLHNVPKLQVRVRGERIPEWIKNCYRGGTLSFYVHGGKFPMCALSFITKQVGCDIEFSLSINGSKVLKGSSRLFVQESESHVLLFDMRAAFKFQRDDLDARLKRDEWNQVEISCLLIKAHAGRKRYNPDWCAAHLYKQQELDIENDILFASPCDPKN* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00039 1055 SUPERFAMILY L domain-like 540 889 - -
Pte17g00039 1055 SMART AAA_5 213 347 IPR003593 GO:0016887
Pte17g00039 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 761 IPR044974 GO:0006952
Pte17g00039 1055 Gene3D - 178 346 IPR027417 -
Pte17g00039 1055 Pfam NB-ARC domain 210 424 IPR002182 GO:0043531
Pte17g00039 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 445 IPR027417 -
Pte17g00039 1055 ProSiteProfiles TIR domain profile. 18 181 IPR000157 GO:0007165
Pte17g00039 1055 Gene3D - 351 435 IPR042197 -
Pte17g00039 1055 SMART till_3 19 156 IPR000157 GO:0007165
Pte17g00039 1055 Pfam TIR domain 20 184 IPR000157 GO:0007165
Pte17g00039 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 159 IPR035897 -
Pte17g00039 1055 Gene3D Ribonuclease Inhibitor 533 696 IPR032675 -
Pte17g00039 1055 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 183 - -
Pte17g00039 1055 Gene3D - 16 177 IPR035897 -
Pte17g00039 1055 Gene3D Ribonuclease Inhibitor 697 924 IPR032675 -
Pte17g00039 1055 SUPERFAMILY "Winged helix" DNA-binding domain 422 525 IPR036390 -
Pte17g00039 1055 PRINTS Disease resistance protein signature 386 400 - -
Pte17g00039 1055 PRINTS Disease resistance protein signature 291 305 - -
Pte17g00039 1055 PRINTS Disease resistance protein signature 216 231 - -
Pte17g00039 1055 PRINTS Disease resistance protein signature 758 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00039 Pte-Chr17 681723 686674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00039 16 771 WRKY Transcription Factor Family AT4G12020 30.218 7.33e-90 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00039 - - qsa:O6P43_008408 883.634