Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g00039 | ATGGAATATGATGACGAGGGAGGTTCAGGTTCATCAATGAGTGATAGTGGCTGGAGTTATGATGTCTTTTTGAGTTTTGCAGGTAAAGACACTCGCTATGGTTTTACAGGTCATCTTTACGATGCCTTGTGTCGAAAAGGAATCAAGACCTTCATGGACACGATGATCAAGAGGGGAGATCAAATTTCACGCGCTCTTACCACCAAAATAGATGAGTCTAGGATTGCTGTTGTTGTTTTCTCTGAGAACTATGCGAAGTCCACTTGGTGTCTGGATGAGCTTGTCAAGATTGTTGAGTGTGTCAAGTCAAAGGGGCAATTGGTCAGATCAATCTTTTATCATGTCCAGCCATCAGATATACAACATGGTAGAAACAGTTTTGGAGATGCATTGACTGAACATGAAAAGAAGTTCAGCAAAGAGAAAGTTGCAAAATGGAGATCAGCTTTAACACAAGTTGCAACTGTATCTGGTTGGCATTTCCAGAACGGGTACGAGTACTTGTTCATAAGAGAGGTAACTAAAGAGATATACACCATACTGACAAGTACAGCTGTTCATGAAGGTAACTCACCAGTTGGTCTGGAGTCTCGCATGTTGGAAGTGAGATCTCTTCTGGAGATAAACTCTGATGACATTGTCAGCATGGTGGGGATATGCGGAATTGGTGGGATTGGAAAAACGACAATTGCGCGAGGTGTATATGATTCCCTTTCTGATCAATTTGAAGCCAAGTCCTTTCTTACCAATGTAAGAGAAAATTCGAGTCAAGGGTTAATATATCTGCAGAAGGTACTCCTTTCAGAGATGCTGGGAGATGGAGATGACAATATTCGCGACGTTAATCAAGGGATGTCTGTAATAAAGAACAGACTTAAACACAGAAAGATTCTTCTGGTTCTTGACGATGTGGATGAGCTGGAACAATTACGAGCTTTAGTTGGAGGGCTTGACTGGTTTGGAAATGGAAGTAGAATTATCATAACAACTAGAGACAAGCATTTGCTCACTTGTCATCGCATTGAAAATGATAAGATCCTTGAGGCTCGGGAATTGAATGATCGAGAAGCCCTTGAATTATTCAGTAGGGAAGCATTCAAGAGATTCAAACCTGATGCAAGTCATGCAAGAATTTACAAAAGGGTCGTAGCATACAGCAAGGGGGTTCCATTAGTTCTGAAAATCATAGGGGCTGATTTGTGTGGAAGGAGCATGGACAAATGGGGCAGTGTCTTGGATGAGTATGAAAGAGTTCCCAAGAGAAAAATTCATGATGTGCTTAAAATAAGTTATGATAGTTTGGAGCATAATGAAAAGGAACTTTTTCTTGACATTGCATGCTTCTTCAAAGGAAGTGAACTCAAAGATGTCAAGAACATACTACGTGATTGTGATTTCTTCACAGATATTGGTTTTGACAAACTCATTGACAAATCTCTTGTATCCTTTCAAGACAAGAAAATATGGATGCATGATCTCATACAGGAAATGGGCAGGAAAATTGTTCAACAGCAGTCAGCAGAGCCTAACCAGCGTTCTAGACTTTGGCATTACAAGGATGTTCATGAAGTACTCACTCGAAATATGGGAACAGACAAAATTCAAGGCATATTTCTACAGACTCCTCATGTAGTGGAATGGAATGGTGAGGCCTTCAAAGCGATGACGAATCTGCGAATACTAATAATCGAACAAGGGAAGTTTTCTACCGGTCCTAGCTACATCCCAAGCAGTTTGAGATTGCTACATTGGGTGGAATATCCTTCACCATGTTTGCCACTAGATTTTGAAGGCAAGAAGCTAGTGGTACTCAAACTGTTAGGGAGTTCCATCCAAAAGCTGCCACTCAAGAAATGCAAAAACTTGACAATCATAGATTTCAGAATGTGTCATTTGTTGAAGGAAATACCTGATGTCTCCGAACTGGCGAATCTAGCAGAGCTTCATGCTGATTACTGTGCCAGTTTGGAAAAAGTTCATGAGTCTGTTGGCCTTCTTGACAAACTAGTCAAGTTGAGTTTTAAAGGCTGCCGAAATATCACAAATTTCCCACATAAGCTGAGGTCCAAATTTCTTGAATCACTAGACATTTCCCATAACTACAAAATCACAAGGTTTCCAAATGTATCAGAAGTGATGGAAAGAATAAGATTCATTGATGTGGGAGGCACCTCTATGGAGAAATTACCGTCTTGCTTTGGAGATCTGGTTGGTCTTGAAGTTCTAAGAATACGTAATTCTCAATTCCTAAAACGAATACCAAGTACTTTTTTTGCTTTGCAAAATCTTAAGGAACTTGATGCAGAGAACTGTCCATTGATTCCAAAGGCCTTGAGGGCCTTAAAATTGAAGTCGATCTCGGCATCATCTGCATTGAACGATGAGGCCATCCACATAACAATGGTTCTCCCGAATTTGATCTCTTTGAATATGAGCCACTGTGATCTTATAGATGAAGATATTCCAGTACTTCTTAGTTGCTTTCCTCGATTGCGAAGCTTATTCATTTCAGGAAACAGATATCTGTCATGCCTCCCTGTGTGCTTCAAAGAATTTCTTTACATGGGGACACTTGACATTGCTTCTTGTAGAAAACTTCAACACATTTATGACATTCCACCAAATCTTTGGGACATTAATGCATCAGACTGCAGTCTGTTGACCGCTCAATCATCAAGTTTACTACTCTCTCAGGGATTACATAATGTTCCAAAGTTACAAGTAAGAGTTCGAGGAGAAAGAATTCCTGAGTGGATAAAAAATTGCTACAGAGGAGGAACACTGTCTTTTTATGTTCATGGTGGGAAATTCCCCATGTGTGCATTGTCCTTTATTACAAAGCAGGTTGGGTGTGACATAGAATTCAGCTTATCCATCAACGGGAGCAAAGTACTGAAAGGATCATCACGGCTGTTTGTTCAGGAATCAGAAAGTCATGTGTTGTTGTTTGATATGAGGGCAGCATTCAAATTTCAGCGAGACGACCTTGACGCACGTCTGAAACGAGATGAATGGAATCAAGTGGAGATTTCTTGTCTGCTCATCAAAGCGCATGCTGGCAGGAAAAGATACAATCCAGACTGGTGCGCAGCTCATTTATACAAGCAACAAGAACTAGATATAGAGAATGACATCCTTTTTGCAAGTCCATGCGATCCTAAAAATTGA | 3168 | 0.404 | MEYDDEGGSGSSMSDSGWSYDVFLSFAGKDTRYGFTGHLYDALCRKGIKTFMDTMIKRGDQISRALTTKIDESRIAVVVFSENYAKSTWCLDELVKIVECVKSKGQLVRSIFYHVQPSDIQHGRNSFGDALTEHEKKFSKEKVAKWRSALTQVATVSGWHFQNGYEYLFIREVTKEIYTILTSTAVHEGNSPVGLESRMLEVRSLLEINSDDIVSMVGICGIGGIGKTTIARGVYDSLSDQFEAKSFLTNVRENSSQGLIYLQKVLLSEMLGDGDDNIRDVNQGMSVIKNRLKHRKILLVLDDVDELEQLRALVGGLDWFGNGSRIIITTRDKHLLTCHRIENDKILEARELNDREALELFSREAFKRFKPDASHARIYKRVVAYSKGVPLVLKIIGADLCGRSMDKWGSVLDEYERVPKRKIHDVLKISYDSLEHNEKELFLDIACFFKGSELKDVKNILRDCDFFTDIGFDKLIDKSLVSFQDKKIWMHDLIQEMGRKIVQQQSAEPNQRSRLWHYKDVHEVLTRNMGTDKIQGIFLQTPHVVEWNGEAFKAMTNLRILIIEQGKFSTGPSYIPSSLRLLHWVEYPSPCLPLDFEGKKLVVLKLLGSSIQKLPLKKCKNLTIIDFRMCHLLKEIPDVSELANLAELHADYCASLEKVHESVGLLDKLVKLSFKGCRNITNFPHKLRSKFLESLDISHNYKITRFPNVSEVMERIRFIDVGGTSMEKLPSCFGDLVGLEVLRIRNSQFLKRIPSTFFALQNLKELDAENCPLIPKALRALKLKSISASSALNDEAIHITMVLPNLISLNMSHCDLIDEDIPVLLSCFPRLRSLFISGNRYLSCLPVCFKEFLYMGTLDIASCRKLQHIYDIPPNLWDINASDCSLLTAQSSSLLLSQGLHNVPKLQVRVRGERIPEWIKNCYRGGTLSFYVHGGKFPMCALSFITKQVGCDIEFSLSINGSKVLKGSSRLFVQESESHVLLFDMRAAFKFQRDDLDARLKRDEWNQVEISCLLIKAHAGRKRYNPDWCAAHLYKQQELDIENDILFASPCDPKN* | 1056 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g00039 | 1055 | SUPERFAMILY | L domain-like | 540 | 889 | - | - | |
Pte17g00039 | 1055 | SMART | AAA_5 | 213 | 347 | IPR003593 | GO:0016887 | |
Pte17g00039 | 1055 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 20 | 761 | IPR044974 | GO:0006952 | |
Pte17g00039 | 1055 | Gene3D | - | 178 | 346 | IPR027417 | - | |
Pte17g00039 | 1055 | Pfam | NB-ARC domain | 210 | 424 | IPR002182 | GO:0043531 | |
Pte17g00039 | 1055 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 445 | IPR027417 | - | |
Pte17g00039 | 1055 | ProSiteProfiles | TIR domain profile. | 18 | 181 | IPR000157 | GO:0007165 | |
Pte17g00039 | 1055 | Gene3D | - | 351 | 435 | IPR042197 | - | |
Pte17g00039 | 1055 | SMART | till_3 | 19 | 156 | IPR000157 | GO:0007165 | |
Pte17g00039 | 1055 | Pfam | TIR domain | 20 | 184 | IPR000157 | GO:0007165 | |
Pte17g00039 | 1055 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 10 | 159 | IPR035897 | - | |
Pte17g00039 | 1055 | Gene3D | Ribonuclease Inhibitor | 533 | 696 | IPR032675 | - | |
Pte17g00039 | 1055 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 16 | 183 | - | - | |
Pte17g00039 | 1055 | Gene3D | - | 16 | 177 | IPR035897 | - | |
Pte17g00039 | 1055 | Gene3D | Ribonuclease Inhibitor | 697 | 924 | IPR032675 | - | |
Pte17g00039 | 1055 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 525 | IPR036390 | - | |
Pte17g00039 | 1055 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
Pte17g00039 | 1055 | PRINTS | Disease resistance protein signature | 291 | 305 | - | - | |
Pte17g00039 | 1055 | PRINTS | Disease resistance protein signature | 216 | 231 | - | - | |
Pte17g00039 | 1055 | PRINTS | Disease resistance protein signature | 758 | 774 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g00039 | Pte-Chr17 | 681723 | 686674 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g00039 | 16 | 771 | WRKY Transcription Factor Family | AT4G12020 | 30.218 | 7.33e-90 | 315 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g00039 | - | - | qsa:O6P43_008408 | 883.634 |