Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00037 ATGAGCAGCTCAGCATCGTTAACGCTGGAGAGGAAATACAAGGGGATTCGACGTCGAAAATGGGGCAAGTGGGTATCTGAAATTCGAGTTCCTGGAAGGGATGAACGTCTTTGGTTGGGTTCATATGGTACCCCAGAGGCAGCAGCCATGGCTCATGATGTTGCAGTATTTTGTCTTAGGAGACCTTGCGCCTTAGAGAAACTCAACTTCCCTTTACAAACGTTGCCAGCTCGTTGCTTTCAAGAAGATATGACGTCGCCTTTGTCTGTGCAGATGTTGGCTTCTGATGCAGGCATGGCTGTGGATGCTCAAATTACTTCTCACTCTCAGGTTTTCTCACACATAGATTCGATGGAGACAAGGAAAAGTGGAGAGATGGCGGGTGAAGTTGTAAACCGTTGCTTGACGTATTGTCCGCTGATCTACAGTACTACGAACGATCATGATAATAAGCTTTCTTATGATGGAGGGGTATGCTATACTACATGTGCCCGGGACAGAAGTCAAGATCCGGAAATAA 520 0.4654 MSSSASLTLERKYKGIRRRKWGKWVSEIRVPGRDERLWLGSYGTPEAAAMAHDVAVFCLRRPCALEKLNFPLQTLPARCFQEDMTSPLSVQMLASDAGMAVDAQITSHSQVFSHIDSMETRKSGEMAGEVVNRCLTYCPLIYSTTNDHDNKLSYDGGVCYTTCARDRSQDPEI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00037 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 120 - -
Pte17g00037 173 SUPERFAMILY DNA-binding domain 12 72 IPR016177 GO:0003677
Pte17g00037 173 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Pte17g00037 173 Gene3D AP2/ERF domain 11 73 IPR036955 GO:0003700|GO:0006355
Pte17g00037 173 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Pte17g00037 173 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Pte17g00037 173 ProSiteProfiles AP2/ERF domain profile. 12 71 IPR001471 GO:0003700|GO:0006355
Pte17g00037 173 Pfam AP2 domain 12 61 IPR001471 GO:0003700|GO:0006355
Pte17g00037 173 SMART rav1_2 12 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00037 Pte-Chr17 661964 662532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00037 10 113 AP2-EREBP Transcription Factor Family AT1G22810 60.577 7.17e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte17g00037 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00037 - - pvy:116111000 143.665