Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00031 ATGCAAGACATCTACTACATGGATGCTGCACCAAGTCGGGTCGGCACTAGCAATACTACGTATAGTACCTCAGGTGCTTCTAGCTCACCTTATAGAGGAGTCCGGAAGAGAAAGTGGGGCAAATGGGTGTCTGAGATTCGTGAACCAGGCACCAAAACAAGGATTTGGTTAGGGAGCTTCGAGACACCGGAAATGGCGGCAGCAGCCTATGATGTCGCCGCACTGCATTTTCGAGGATGCGACGCGAGGATAAACTTCCCTGAATTGGTGAATAGCCTGCCCCATCCAGCAAGCAACAATGCCGAAGACATAAGAATGGCAGCACATGAGGCTGCCCTGAGGTTAAGGACCAACAAAGACCAAGTGGATGCAGCTGGTGGTGGCTCTAGCTCAAGTGCTGGTGGGGCACGGCCACCCATCACAGTGAGACTCTCTCCAACTCAAATTCAGGCCATCAACGAGTCACCTCTGGATTCACCCAAGATGTGGATGCAAATGACAGAAGCACTCATGTCTGAGGAGTCTATTATGTATGCTAATAATTTTGAGGAGATGGAGTGGGAGGATATACAAAATGATTCTCTCTGGGATCCTTAG 597 0.4992 MQDIYYMDAAPSRVGTSNTTYSTSGASSSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGCDARINFPELVNSLPHPASNNAEDIRMAAHEAALRLRTNKDQVDAAGGGSSSSAGGARPPITVRLSPTQIQAINESPLDSPKMWMQMTEALMSEESIMYANNFEEMEWEDIQNDSLWDP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00031 198 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pte17g00031 198 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Pte17g00031 198 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pte17g00031 198 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Pte17g00031 198 MobiDBLite consensus disorder prediction 121 140 - -
Pte17g00031 198 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Pte17g00031 198 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Pte17g00031 198 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Pte17g00031 198 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Pte17g00031 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 171 - -
Pte17g00031 198 Pfam AP2 domain 31 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00031 Pte-Chr17 589795 590642 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00031 15 199 AP2-EREBP Transcription Factor Family AT1G71450 58.378 5.88e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte17g00031 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00031 - - zju:107421318 264.233