Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00029 ATGGAAGAAGCCAAGGAAAAGGGTGCGAATACTGCTCCCACCTACCATGGAGTTCGCAAGCGAAAATGGGGCAAATGGGTGTCTGAGATTCGTGAGCCAGGGAAGAAGAGTAGAATTTGGTTAGGAAGCTACCAAGCACCCGAAATGGCAGCGGCAGCTTATGACGTAGCAGCTCTGCACCTTAAAGGGAGCTCTGCACGCCTCAACTTTCCCGAGCTGGTCGGAAGTTTCCCACGTCCACTGAGTTCAAGGGCTGAGGATGTGCAGTTGGCAGCTCAAGAGGCAGCATTGAGGTTTAAGAGACCGGTGGTGGGTGTGGGTTCAGAGAATTGGACAGTGCCAGTGACAGTGGGGTTGTCACCCTGCCAGATTCAGGCGATCAATGAGTCGCCATTGGATTCACCAAAGATGTGGATGCCAACGAGTGAGGCAGTGAAGTTAGATTGGGATGGGTCTCTGGCATTCTACAATGATAATTTTGTTGATTTGTGCAATTGGGAAGAAATACAGTATCAGTATGTGTCCATATGGGATTCCTTGCTAGATTAA 549 0.4973 MEEAKEKGANTAPTYHGVRKRKWGKWVSEIREPGKKSRIWLGSYQAPEMAAAAYDVAALHLKGSSARLNFPELVGSFPRPLSSRAEDVQLAAQEAALRFKRPVVGVGSENWTVPVTVGLSPCQIQAINESPLDSPKMWMPTSEAVKLDWDGSLAFYNDNFVDLCNWEEIQYQYVSIWDSLLD* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00029 182 FunFam Ethylene-responsive transcription factor 2 14 72 - -
Pte17g00029 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 118 - -
Pte17g00029 182 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Pte17g00029 182 Gene3D AP2/ERF domain 14 73 IPR036955 GO:0003700|GO:0006355
Pte17g00029 182 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Pte17g00029 182 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Pte17g00029 182 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Pte17g00029 182 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pte17g00029 182 PRINTS Ethylene responsive element binding protein signature 53 73 IPR001471 GO:0003700|GO:0006355
Pte17g00029 182 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00029 Pte-Chr17 585624 586184 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00029 2 178 AP2-EREBP Transcription Factor Family AT1G71450 47.541 2.03e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte17g00029 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00029 - - qsu:111995063 222.246