Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00014 ATGGCTTGTGCTGCTGCTTCTCATCTTTTCTCTGGCTCCCCTATGCTTCGGAATCAATCAGTTAAAAAATGGAGACTACTGGGGAGCACAGATTGTAAAAATAAGATTAGGCTGCACCTTCAAGTGAAAGCATCACAAGGTCCAACTAGACCTGGTGAGAGAGCACCCCCGGGAGTTGACACAAGGATACATTGGGACAACGAAGATGAAGGTTGGATTGGAGGAAGCACGAGTGGCTCTCAGCAGTCAGAAGAGAAACCCAATGATGCATTGGCTGACAGATTTGCTGATTTGCTGAAAGACGCTTCCGATTCTCACTATCAATTCTTAGGTGTGTCTCCAGAAGCTGACTTGGAAGAGATCAAAGCTGCTTACAGGAGATTATCAAAGGAATACCATCCAGACACAACTTCACTCCCCCTGCAAACTGCTTCACTAAAATTCATGAAACTAAAAGAAGTTTATGACGTGTTAAGCAGTGAAGAAAGCCGCAAGTTTTATGATTGGACGCTTGCACAAGAGGCTGCCAGTCGTCAAGCAGAGAAACTGAGAATGAGATTGGAAGATCCCAGAGAGATAGAATTGAAGAACTGGGAATCTGTTCCAGATATGGTGGATCGCCTTGGTGGAAAGAACTTGGAGCTCAGTGATCAAGCAATCACTGCACTCACCATTGATGTTTTCATTATTATTTTTGCTATATGCTGTATCATATATGTGATATTCTTCAAAGTACCATACTACTACTAG 750 0.432 MACAAASHLFSGSPMLRNQSVKKWRLLGSTDCKNKIRLHLQVKASQGPTRPGERAPPGVDTRIHWDNEDEGWIGGSTSGSQQSEEKPNDALADRFADLLKDASDSHYQFLGVSPEADLEEIKAAYRRLSKEYHPDTTSLPLQTASLKFMKLKEVYDVLSSEESRKFYDWTLAQEAASRQAEKLRMRLEDPREIELKNWESVPDMVDRLGGKNLELSDQAITALTIDVFIIIFAICCIIYVIFFKVPYYY* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00014 249 FunFam DnaJ homolog subfamily C member 4 94 192 - -
Pte17g00014 249 SUPERFAMILY Chaperone J-domain 63 167 IPR036869 -
Pte17g00014 249 PRINTS DnaJ domain signature 125 140 IPR001623 -
Pte17g00014 249 PRINTS DnaJ domain signature 107 125 IPR001623 -
Pte17g00014 249 PRINTS DnaJ domain signature 143 163 IPR001623 -
Pte17g00014 249 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 2 247 IPR044618 -
Pte17g00014 249 SMART dnaj_3 104 163 IPR001623 -
Pte17g00014 249 Pfam DnaJ domain 106 168 IPR001623 -
Pte17g00014 249 CDD DnaJ 106 159 IPR001623 -
Pte17g00014 249 Gene3D DnaJ domain 94 190 IPR036869 -
Pte17g00014 249 MobiDBLite consensus disorder prediction 43 88 - -
Pte17g00014 249 ProSiteProfiles dnaJ domain profile. 105 171 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00014 Pte-Chr17 232609 233883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00014 106 173 C2H2 Transcription Factor Family AT1G74250 37.500 3.14e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00014 K23051 - qsa:O6P43_001846 308.916