Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00012 ATGACTCTCCCTTTACTGTTTCTTTTGTTCCTATGCGTTCCCTTCTCGGAGGCCAAACTCTCAACCGAATACTACAAGACTAAATGTCCTGACTTTCAGAGAATTGTAAGGGAAACTGTTTTAACTAAACAACAATCTACCCCAACCACAGCCGCTGGAATTCTCCGCCTTTTCTTCCATGACTGCTTTCTTGACGGTTGTGATGCTTCTGTCTTGATCGCTTCCAATGCATACAACAAAGCTGAACGTGATGCCGACATCAATCTGTCCCTTTCTGGAGATGCCTTTGATGTGATAACCAAAATAAAGACAGCCTTAGAGCTTGCATGCCCTGGAGTTGTTTCATGTGCTGACATTGAGGCTCAAGCCACTAGGGATCTCGTCAAGATTGTTGGGGGTCCTTTCTATGAGGTCCCTCTAGGGAGGAAGGACAGCCTTGTGTCTCGTTCTGCAGGTGTTGACGTTCACATGCCTAGAACCAACATGAGCATGAATAATGTAATAGAAATATTTGCCAAAAGGGGATTCAATGTACAAGAAATGGTTGCATTGATGGGCGCACACAGCATTGGTTTTGCTCATTGCAAGGAATTCGTTGATCGAATTTTCAGCCACAATGGTAAAGCTCAGTCAATGCACCCACAATTTGCAGAGCGTTTGAGAAAATTGTGTGCCAACTACACCAAGGATCCAACATTGTCAGCATTCAACGATGTCAGGTCACCAGGCAACTTTGACAACCTTTACTACAAGAATATATTACATGGTCTGGGACTGTTGGCTTCAGACCATGCAATGAGTGTGGATGGAAGGACAAAACCGTTTGTGGAGCTTTATGCTAATAACCAAGAAGCCTTCTTCAAGGACTTCGCAAAAGCCATGAAGAAACTGAGTAAGTATGGAATTAAGATTGGCGTCCAAGGAGAAGTGAGGAACAGATGCGACGTGTTCAATCACATGAAAATATAG 969 0.4376 MTLPLLFLLFLCVPFSEAKLSTEYYKTKCPDFQRIVRETVLTKQQSTPTTAAGILRLFFHDCFLDGCDASVLIASNAYNKAERDADINLSLSGDAFDVITKIKTALELACPGVVSCADIEAQATRDLVKIVGGPFYEVPLGRKDSLVSRSAGVDVHMPRTNMSMNNVIEIFAKRGFNVQEMVALMGAHSIGFAHCKEFVDRIFSHNGKAQSMHPQFAERLRKLCANYTKDPTLSAFNDVRSPGNFDNLYYKNILHGLGLLASDHAMSVDGRTKPFVELYANNQEAFFKDFAKAMKKLSKYGIKIGVQGEVRNRCDVFNHMKI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00012 322 CDD secretory_peroxidase 19 317 IPR033905 GO:0004601|GO:0042744
Pte17g00012 322 PANTHER - 6 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 Gene3D - 23 318 - -
Pte17g00012 322 Gene3D Peroxidase, domain 2 158 297 - -
Pte17g00012 322 FunFam Peroxidase 23 174 - -
Pte17g00012 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Pte17g00012 322 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 ProSiteProfiles Plant heme peroxidase family profile. 19 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Pte17g00012 322 FunFam Peroxidase 158 297 - -
Pte17g00012 322 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 Pfam Peroxidase 41 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte17g00012 322 SUPERFAMILY Heme-dependent peroxidases 20 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00012 Pte-Chr17 223667 224635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00012 5 323 Peroxidase AT5G47000 58.696 8.44e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00012 K00430 - qsa:O6P43_022749 450.284