Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00007 ATGAGTATATATGTAGGCTTTTTGGTTACCCTTGTTGCAGTTATTGTAGCTTCTGCTGCCGTTTACATCAATAACGTTAGGAAACCAAAAGGTTGCTTAGATCCCAACCAATTCAAGGAATTCAAACTTGTGAAAAGAACTCAGCTCAACCACAATACTGCAAAATTCAGATTTGCTCTTTCAAAACCTACTTCTGTATTAGGCCTTCCTGTAGGGAAACATGTAATTTGCAGGGGAAAAGATATCCTAGGTGAAGAAGTTATCAGACCCTATACCCCAATCACTTTGGACAGTATTGACATTGGATACTTTGAACTGGTTGTGAAGATGTACTCGAAAGGAAGGATGTCTCATCATTTTAGAGTTATGCGTGAAGGAGACTTCTTGGCTGTGAAAGGACCAAGGGGTCATTTCAACTATAGACCTGGTCAAGTGAGAGCGTTTGGAATGCTTGCTGGAGGCTCGGGCATAACTCCAATGTTTCAGCTCATCAAAGCCATATTAGAAAATGTGAAGGACAAGACTCATTTGCAACTTATTTATAGCAATACTACATTTGAGGATATTATCTTGAAGGAAGAATTGGATGGCTTCGAAACTAAATTTCCAGACCGTTTTCGAGTTTATCATGTTCTAAGTCAGTCACTCTCACTGGATGAAAGCAACTTCAAACCAACGCCCCCTATGGCATGGGATGGTGGGGTGGGCCATATATCCAAGGACATGATTGAAAGGCATTGTCCACCACCTGCCCCAGATATTAAGGTATTTTTCGTTACCTTCAATTTGATGTATTGTTTTTCTGACACAGTATCGTACAATATTATTAGCTTTCCCATTACTTCCATAGACAACTTCAAATCTGCAGATATTAAGGTGCGGACCACTAGGCATGAACAACACCATGGCTGA 912 0.4035 MSIYVGFLVTLVAVIVASAAVYINNVRKPKGCLDPNQFKEFKLVKRTQLNHNTAKFRFALSKPTSVLGLPVGKHVICRGKDILGEEVIRPYTPITLDSIDIGYFELVVKMYSKGRMSHHFRVMREGDFLAVKGPRGHFNYRPGQVRAFGMLAGGSGITPMFQLIKAILENVKDKTHLQLIYSNTTFEDIILKEELDGFETKFPDRFRVYHVLSQSLSLDESNFKPTPPMAWDGGVGHISKDMIERHCPPPAPDIKVFFVTFNLMYCFSDTVSYNIISFPITSIDNFKSADIKVRTTRHEQHHG* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00007 303 SUPERFAMILY Riboflavin synthase domain-like 29 142 IPR017938 -
Pte17g00007 303 FunFam NADH-cytochrome b5 reductase 131 266 - -
Pte17g00007 303 PANTHER NADH-CYTOCHROME B5 REDUCTASE 28 257 IPR001834 GO:0016491
Pte17g00007 303 FunFam NADH-cytochrome b5 reductase 31 131 - -
Pte17g00007 303 CDD cyt_b5_reduct_like 41 257 - -
Pte17g00007 303 Pfam Oxidoreductase NAD-binding domain 150 248 IPR001433 GO:0016491
Pte17g00007 303 Pfam Oxidoreductase FAD-binding domain 41 140 IPR008333 -
Pte17g00007 303 PRINTS Cytochrome B5 reductase signature 89 96 - -
Pte17g00007 303 PRINTS Cytochrome B5 reductase signature 126 140 - -
Pte17g00007 303 PRINTS Cytochrome B5 reductase signature 187 198 - -
Pte17g00007 303 PRINTS Cytochrome B5 reductase signature 67 78 - -
Pte17g00007 303 PRINTS Cytochrome B5 reductase signature 149 168 - -
Pte17g00007 303 Gene3D Translation factors 29 132 - -
Pte17g00007 303 Gene3D - 133 264 IPR039261 -
Pte17g00007 303 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 36 141 IPR017927 GO:0016491
Pte17g00007 303 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 127 258 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00007 Pte-Chr17 133867 141576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00007 22 257 NADPH P450 reductases AT5G17770 61.441 2.18e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00007 K00326 - pop:7469501 348.977