Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00004 ATGGGTCAGGCAGTGGCCATGCGTTCAGCCTCCGATCTCTCTGTCTTTTACCGATGTGGCTTTGAAGGTTACCAAGACACACTCATGGTTCACTCACAGAGACAATTTTATAGAGAATGTTACATATACGGCACCATTGACTTCATATTTGGAAACGCTGCTGTTGTTTTCCAAAACTGTATTATTTATGTAAGAAGGCCTTTATGGGGTCAAGCGAACATGATAACAGCCCAAGGAAGAAATGACCAATTTCAAAACACTGGGATCACAATTCATAATTGTCGAATTCAGGCTGCACCAGATCTCAGACCTGTTGTTGTAGCTGTCAGAACTTATATGGGTCGGCCATGGCAGCAATATGCCCGAGTGGTTGTCATGAAAACTTATTTGGACAACTTGATAAACCCATCGGGGTGGTCAAAATGGGGGACCACTGATTTTGCTATCAACACTCTGTACTTTGGAGAGTACATGAATTTTGGGCCTGGTTCGTCCACAAGATACAGAGTGCGATGGCGTGGATTTCATAAGATATCCAGGGCTTCTCAAGCTCATCCCTTTGCAGTCAGCAGTCTACTGGGCGGTCGGACATGGTTACCTGCGACGGGCGTGCCTTTTACTTTAGTTTGCATTATGCCAATGTCTCCGTGGGGCAAGCAAATCGTTTCTTGTGGCACTGGATACTGGTAG 690 0.4551 MGQAVAMRSASDLSVFYRCGFEGYQDTLMVHSQRQFYRECYIYGTIDFIFGNAAVVFQNCIIYVRRPLWGQANMITAQGRNDQFQNTGITIHNCRIQAAPDLRPVVVAVRTYMGRPWQQYARVVVMKTYLDNLINPSGWSKWGTTDFAINTLYFGEYMNFGPGSSTRYRVRWRGFHKISRASQAHPFAVSSLLGGRTWLPATGVPFTLVCIMPMSPWGKQIVSCGTGYW* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00004 229 PANTHER PECTINESTERASE 3 202 - -
Pte17g00004 229 ProSitePatterns Pectinesterase signature 2. 42 51 IPR033131 -
Pte17g00004 229 Pfam Pectinesterase 2 195 IPR000070 GO:0030599|GO:0042545
Pte17g00004 229 SUPERFAMILY Pectin lyase-like 2 208 IPR011050 -
Pte17g00004 229 Gene3D - 1 209 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00004 Pte-Chr17 44217 45573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00004 2 207 Carbohydrate Esterase AT5G51500 67.788 1.04e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00004 K01051 - cpap:110823299 339.732