Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01390 ATGGCAAAGAAGAAAAATCCTTTGGTTTATTTGGATGTTTCGATAGATGGAGATCCAGTTGAAAGAATTGTTTTTGAGCTTTTCAATGACGTAGCTCCAAAGACTGTGGAAAACTTTCGTGCCCTTTGTACTGGAGAAAAAGGAATTGGGCCAAAAACTGGAAAACCTCTGCACTACAAGGGCTCTTTCTTCCATCGCATTGTGAAAGGATCCTTTGTGCAGGTATGTACTGGTGGGGAAAGTATATATGGAATAAAGTTTCCAGATGAGTCACCTAAGCTTAAGCATGATGAACGTGGCATGCTATCTATGCCGATAGCTGATCGCGACAACCTTGGTTCACATTTTATCATCACCTTGAAAGCTGATCACGATCTTGACAGAAAGCATGTAGTTTTTGGGAAACTTGTTCAGGGACTTGATGTATTACAGAAAATCGAAGATGTTGGTGATGAAGAAGGGTATCCTACAGTAACAGTTAAAATAATATACTGTGGTGAATATACTGAAGATAAGAAGAGATCAAGTAAATCAAAAACAGGAAAAGATGCTCCTTCTGAGGGAAACAATTACGATTCAAAGCGAGGAAAGCATAAAAAATCATCCAGAGACAAAAAGAAGAGGAGAAAAAGATACTATTCTGATTCAGATACTTCCTCTGTTTCCGAAATTGAATCTTCAGAATCTGATACTGATTCTGACTCTGATTCATATTCATCCTCATCATCTGATATTAGTTCTTCAGATGACGAGCGAAGAAAACGAAAAAGATCATCTAGGAAAGGCAAGTATCGACGTGGGAAAAGAAGGGACAGAAGACGTGATAAGAAACGTAGACGACGAGATAAAAGATCAAAGCGCCGGACAAAAAGGGCATCATCAAGTCTCTCGGATACTGATTGTGAAAGTGGAAGTGACAATAGCTCTGAAAGCGATGGTGCTGATATCAATGGTAAAGATAAGCGTAAAGATCAGTCGAAGAAACATGTGGAGAAGGAAGGCACTTTTGACCATTTTAAAGAAGATACAGTGGGAGGAGGATCCCCAAAGGAAAATGGACAGAACAGAACTAATGGCACTGCAGCAGACTCTAAAACTGGCAGGAGTGTAGATAGACAAAATGATGTGGTTGATCATCCAAGCAAATCTAGGAGTACAAGTCCCAAGAGAGCCGTGAGTAAGAGTATGAGTATTAGCCCTCGGAAGAGTACAAGCAGAAGTCCTATGTCTGGCGTAAAAGGGAATATCAGCACCCCTGCTCCATCAAGAAGTCTCAGCCAGAGCAGGAGTCCTGTGCGAAGAATCAGCAGAAGTTCTGCCAGCAGGAGCCGTAGTAAGAGTCCTGTTAGACGTATCAGCAGGAGTCCAAGACAGAGTATCAGTGGTAGTCCAATAAGGGGGACGAAGGGAAGAAGTGTCAGTAGGAGCCCAATAAGAGCACGGTCCCGCAGAAGGTCAAATGAGAGTTCACAAAGAAGTCCAAGTAGGGCCCCTCCAATAACATCGTCACGAAAATCGGTAAGCAGAATACCTGCAAGAGTTCTGAGGAAAAGCAAGAGTGCAAGTAGAAGTCCAGTTAGATCCTCTGCAAGAAGCTTAAGCCGTAGCTCTGGTAGGGGCTATTCAAGAAGAAGCATTAGCCGAAGTCCAATTAGGCCCACTAGCAGAAGTAACCGCCGTAGTTATTCTAAGAGTCCCAGTCCTATACGAAGGCCAAGGTCACCGAAAGATCGTGGGAGGAGTATATCAAGAAGCATATCACCAGTTTCTTCGCCCAAGCGTATTCGGAGAGGGAGGGGTTTCAGTGACCGATTTTCATATGCTAGAAGGTATAGAACACCTTCTGTCTCACCACCCAGGTACCGTTATGATGGCAGAGGTGACCGTGACAGGTATAAAAGTAGAAGAAGCAGGACCCCCTCTGTGTCACGTAGTCCACGATATCGCCGCCATCATAGCCGGAGTCCTAGCCATAGTCGTAATGCCATCCACATTCGAAGTCGAAGTCGAAGTCAAAGTTGCAGCCCGGTTCGAGGAACTGGTCCCAGCCCAAATCGTAGCCGCAGTAAACTGGTTCGAGGCACTAGTCGCGGCCCAAATCGTAGCTGCAGTAATAGCCCCGTTCGATATCGCAATGAGAGGCGCAGGTCACCTTCTAGAAGTAGGAGTCCATCTAATTCGAGATCTTCCGTTTCTGGTTCTCCACAAAAGGGAAGCAAAGAGAGATCGAGGTCTTCGTCGAAAAGCTCAGATGGGAAAAAAGGGTTGGTGTCTTATGGGGAAGGATCTGCCGATTCTGGCTAG 2304 0.447 MAKKKNPLVYLDVSIDGDPVERIVFELFNDVAPKTVENFRALCTGEKGIGPKTGKPLHYKGSFFHRIVKGSFVQVCTGGESIYGIKFPDESPKLKHDERGMLSMPIADRDNLGSHFIITLKADHDLDRKHVVFGKLVQGLDVLQKIEDVGDEEGYPTVTVKIIYCGEYTEDKKRSSKSKTGKDAPSEGNNYDSKRGKHKKSSRDKKKRRKRYYSDSDTSSVSEIESSESDTDSDSDSYSSSSSDISSSDDERRKRKRSSRKGKYRRGKRRDRRRDKKRRRRDKRSKRRTKRASSSLSDTDCESGSDNSSESDGADINGKDKRKDQSKKHVEKEGTFDHFKEDTVGGGSPKENGQNRTNGTAADSKTGRSVDRQNDVVDHPSKSRSTSPKRAVSKSMSISPRKSTSRSPMSGVKGNISTPAPSRSLSQSRSPVRRISRSSASRSRSKSPVRRISRSPRQSISGSPIRGTKGRSVSRSPIRARSRRRSNESSQRSPSRAPPITSSRKSVSRIPARVLRKSKSASRSPVRSSARSLSRSSGRGYSRRSISRSPIRPTSRSNRRSYSKSPSPIRRPRSPKDRGRSISRSISPVSSPKRIRRGRGFSDRFSYARRYRTPSVSPPRYRYDGRGDRDRYKSRRSRTPSVSRSPRYRRHHSRSPSHSRNAIHIRSRSRSQSCSPVRGTGPSPNRSRSKLVRGTSRGPNRSCSNSPVRYRNERRRSPSRSRSPSNSRSSVSGSPQKGSKERSRSSSKSSDGKKGLVSYGEGSADSG* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01390 767 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 166 IPR002130 GO:0000413|GO:0003755
Pte16g01390 767 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 167 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 368 385 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 622 637 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 173 767 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 313 345 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 386 470 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 348 367 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 666 707 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 521 568 - -
Pte16g01390 767 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 143 IPR002130 GO:0000413|GO:0003755
Pte16g01390 767 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pte16g01390 767 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 115 IPR002130 GO:0000413|GO:0003755
Pte16g01390 767 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pte16g01390 767 MobiDBLite consensus disorder prediction 296 312 - -
Pte16g01390 767 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 167 IPR002130 GO:0000413|GO:0003755
Pte16g01390 767 SUPERFAMILY Cyclophilin-like 4 170 IPR029000 -
Pte16g01390 767 MobiDBLite consensus disorder prediction 491 508 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 722 740 - -
Pte16g01390 767 Gene3D - 1 168 IPR029000 -
Pte16g01390 767 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 1 168 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 256 290 - -
Pte16g01390 767 MobiDBLite consensus disorder prediction 638 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01390 Pte-Chr16 33296460 33301576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01390 26 163 U-box Gene Family AT5G67530 38.356 4.64e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01390 K09566 - cave:132189182 501.901