Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01384 ATGCCACAACATCTGCTCCATGGGATTCTATCCGTGACAATATACGAAGTGGATAGGCTGCATATGAGTTGCAACTTCGATTTCCTTCGCAAGATTGTTGGGACAAAACTTTATGCAACCGTTGATTTGGACAAAGCAAGGGTTGGGAGAACCCGAACTGTAGAGCACGACACCTCCCATCCACGGTGGTCCGAGTCATTCCACATATATTGTGCGCATTCCATTTCAAATGTAATATTCACTGTAAAAGATGGCAACCCCATCGGAGCAACTCTTTTAGGAAGAGCTTATGTGCCCGTTGAACATGTCATCAAGGGTTTCCTATTAGACAGATGGGTGGATATACTGGACGAGCAGCACAATCCTGTTAAAGGTGCCTCTAAGATTCACGTCAAGATGCAGTATTTCAGTGCTACTGAAGACAAGAGCTGGTCTCAGGGTATCAGGAATGCACAATATCCCGGCGTTCCTTTCACTTACTTCAATCAAAGACAAGGCTGCAAAGTCACTCTCTACCAAGATGCTCATATGCCCAATGATTCTCTCATTCCTTGGATCCCACTATCTGGAGGTAAATACTATGAGCATGGGAAATGCTGGCAGGAAGTTTTGGATGCCATAATCAACGCTAAGCACTTCATTTACATCACGGGTTGGTCTGTCTATACTGAGATAACCTTAGTCAGGGACCCAAAAAAACAAGAGACAAAAGGTGACATGGACAATGACATGACCCTCGGTAAGCTGCTCAAGAGGAAGGCTGACGAAGGCATCGCTGTCCTCATGCTTGTATGGGATGACAAAACTTCTGATCCAGTGTTCAGGAAAGACGGCCTTATGGCAACTCACGATCAAGAAACTGAAGAGTACTTCAGAAATACAAACGTTCATTGCTTTCTTTGTCCTAGAAACCCTGATGGGGGCAGGAGCATAGTTCAGGGAGTCGAAGTTTCAACCATGTTTACTCACCACCAGAAGACAATTGTTGTAGACTTTGAAGTTCCTGGAGGAGGAACGCAAATGAGGCGTATCAAAAGTTTCATAGGTGGCATAGATCTCTGCGATGGAAGATACGACACGTACGAACATCACCTGTTTGCAACTCTGAACACTGTCCACTACAATGATTTCCATCAACCTAACTTCCCAGGTGCTTCAATCAAGAAAGGGGGTCCAAGGGAGCCCTGGCATGACGTTCACTGCCAACTAGAAGGGCCTGTTGCTTGGGATGTCCTGTACAATTTTGAGCAGAGATGGGAGAAGCAAGTGGGAAAGCGATTCTTGATTTCCCGGGACAAGCTCGATAAAATTATAGTTTCTCCATCAGCAGTAACAACATCAGAAGATAGAGATACATGGAATGTACAATTGTTCAGGTCCATAGATGGTGGCGCTGTTGGCTTTCCTGAAGATCCAGTCGCAGCAGCTGAATCAGGCCTTATTAGTGGGAAAAACAGCGTCATTGAAAGAAGTATTCAAGATGCTTACATCCATGCCATTCGCCGAGCTAAGAATTTCATCTACATTGAAAATCAGTATTTCCTCGGGAGCTCCTTTGGGTGGAAAGCGTCGCCTGATATCGTAGTTGAGGATATTAATGCCTTGCATCTTATACCAAGAGAGTTGTCACTCAAGATAGTGAGTAAGATTGAAGCAGGTGAAAGGTTTGCTGTGTACGTTGTGATTCCAATGTGGCCAGAAGGTGTACCCGAGAGCGGTTCAGTTCAGGCAATACTAGATTGGCAAAGAAGAACGATGGAGATGATGTACACTGATATTGTTGCAGCAATACGTAGAAAAGGAATTCAGGCTAACCCGAGGGACTACTTGTCATTTTTCTGCCTCGGAAACAGGGAGACGAAGAAAGTCGGAGAATACGTACCTCCAGAAAAACCAGAACCCAACACTGATTACAGCAGAGCTCAACATTCCCGTCGCCTTATGATATATGTTCATGCCAAGATGATGATAGTTGATGACGAGTACATCATCATTGGGTCCGCAAACATTAACCAAAGATCAATGGATGGGGCGAGGGACACAGAAATAGCTATGGGAGCATTCCAGCCGCATCACCTTACAGCCTGGGGACCACCTAGGGGTCACATATATGGGTTCAGAAGAGCACTGTGGTATGAGCACTTTGGAGAGCCTGACGATGAAGCCTTTAACCATCCAGAACGAGAGGAATGCATCAAGCTTGTCAATCGTATAGCTGAGCTGAATTGGAATTTGTACGCAGAGGACACGGCGAGGAGCGACTTGCGGGTTCACCTCCTGCGCTATCCTATTGAAGTGAGCGGTGATGGCACGATTGGGACATTGCATGGTTTAGACCACTTTCCTGACACGGAGGCTCGAATCTTGGGTTCCAAATCTGAGATCCTTCTCCCAATTCTCACAACCTAG 2409 0.4579 MPQHLLHGILSVTIYEVDRLHMSCNFDFLRKIVGTKLYATVDLDKARVGRTRTVEHDTSHPRWSESFHIYCAHSISNVIFTVKDGNPIGATLLGRAYVPVEHVIKGFLLDRWVDILDEQHNPVKGASKIHVKMQYFSATEDKSWSQGIRNAQYPGVPFTYFNQRQGCKVTLYQDAHMPNDSLIPWIPLSGGKYYEHGKCWQEVLDAIINAKHFIYITGWSVYTEITLVRDPKKQETKGDMDNDMTLGKLLKRKADEGIAVLMLVWDDKTSDPVFRKDGLMATHDQETEEYFRNTNVHCFLCPRNPDGGRSIVQGVEVSTMFTHHQKTIVVDFEVPGGGTQMRRIKSFIGGIDLCDGRYDTYEHHLFATLNTVHYNDFHQPNFPGASIKKGGPREPWHDVHCQLEGPVAWDVLYNFEQRWEKQVGKRFLISRDKLDKIIVSPSAVTTSEDRDTWNVQLFRSIDGGAVGFPEDPVAAAESGLISGKNSVIERSIQDAYIHAIRRAKNFIYIENQYFLGSSFGWKASPDIVVEDINALHLIPRELSLKIVSKIEAGERFAVYVVIPMWPEGVPESGSVQAILDWQRRTMEMMYTDIVAAIRRKGIQANPRDYLSFFCLGNRETKKVGEYVPPEKPEPNTDYSRAQHSRRLMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAFQPHHLTAWGPPRGHIYGFRRALWYEHFGEPDDEAFNHPEREECIKLVNRIAELNWNLYAEDTARSDLRVHLLRYPIEVSGDGTIGTLHGLDHFPDTEARILGSKSEILLPILTT* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01384 802 Pfam Phospholipase D Active site motif 648 674 IPR001736 GO:0003824
Pte16g01384 802 Pfam Phospholipase D Active site motif 319 357 IPR001736 GO:0003824
Pte16g01384 802 CDD C2_plant_PLD 5 136 - -
Pte16g01384 802 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Pte16g01384 802 Gene3D C2 domain 5 149 IPR035892 -
Pte16g01384 802 Pfam Phospholipase D C terminal 720 792 IPR024632 -
Pte16g01384 802 SMART pld_4 319 357 IPR001736 GO:0003824
Pte16g01384 802 SMART pld_4 647 674 IPR001736 GO:0003824
Pte16g01384 802 SUPERFAMILY Phospholipase D/nuclease 140 429 - -
Pte16g01384 802 Gene3D Endonuclease Chain A 475 692 - -
Pte16g01384 802 PANTHER PHOSPHOLIPASE D 5 791 IPR015679 -
Pte16g01384 802 FunFam Phospholipase D 460 693 - -
Pte16g01384 802 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 647 674 IPR001736 GO:0003824
Pte16g01384 802 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 136 IPR035892 -
Pte16g01384 802 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 319 357 IPR001736 GO:0003824
Pte16g01384 802 Pfam C2 domain 8 114 IPR000008 -
Pte16g01384 802 PIRSF PLD_plant 1 802 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte16g01384 802 FunFam Phospholipase D delta 190 437 - -
Pte16g01384 802 SUPERFAMILY Phospholipase D/nuclease 489 728 - -
Pte16g01384 802 Gene3D Endonuclease Chain A 189 446 - -
Pte16g01384 802 SMART C2_3c 9 112 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01384 Pte-Chr16 33244333 33247790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01384 1 803 Phospholipase D Gene Family (Wang group) AT3G15730 65.648 0.0 1121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01384 K01115 - qsa:O6P43_019442 1181.39