Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01383 ATGTCTGTCCTCTGCAGGTCAAATACAAGTGAATATCAGCTAATTGAAACAGAGGTGAGAAAGGTGTTGTCTACGTCCAAGGCTGCCGGGATGCTTCGTCTGGTTTTCCATGATGCTGGGACCTATGAAATGGATGAAAACTCAGGTGGTATGAACGGTTCTATTGTATATGAACTTGATAGACCAGAAAATGCGGGTCTCAGAAAATCTATAAAGATATTAAATAAAGCAAAGACAGAGATAGATACTGTACGACCAGTATCCTGGGCAGACATAATTGCCGTGGCTGGAGCTGAAGCAATTTCTATATGCGGAGGTCCATCCATCAAAGTTCGTTTGGGAAGACTAGATTCACTGGAACCTGACCTTGAAGGAAAAATGCCTCAAGAGTCTCTAGATGCCTCTGAACTCGAGAACTTGTGGCTCTGTCTGGAGCTCATACTCTCGGAAATAAAGGTTTTGGAAACCCCAACTCATTTGACAATTCATATTACAAAATCCTTCTGGGGAAGCCATGGACCTCTTCTGCTGGTATGTCAAGCATGA 546 0.4322 MSVLCRSNTSEYQLIETEVRKVLSTSKAAGMLRLVFHDAGTYEMDENSGGMNGSIVYELDRPENAGLRKSIKILNKAKTEIDTVRPVSWADIIAVAGAEAISICGGPSIKVRLGRLDSLEPDLEGKMPQESLDASELENLWLCLELILSEIKVLETPTHLTIHITKSFWGSHGPLLLVCQA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01383 181 PRINTS Plant ascorbate peroxidase signature 46 56 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 PRINTS Plant ascorbate peroxidase signature 86 104 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 PRINTS Plant ascorbate peroxidase signature 28 43 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 PRINTS Plant ascorbate peroxidase signature 105 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 Gene3D - 6 140 - -
Pte16g01383 181 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 10 139 IPR044831 GO:0004601|GO:0034599
Pte16g01383 181 ProSitePatterns Peroxidases active site signature. 28 39 IPR019794 GO:0004601
Pte16g01383 181 Pfam Peroxidase 19 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 CDD plant_peroxidase_like 25 134 - -
Pte16g01383 181 FunFam L-ascorbate peroxidase 18 134 - -
Pte16g01383 181 PRINTS Haem peroxidase superfamily signature 28 42 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 PRINTS Haem peroxidase superfamily signature 87 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 PRINTS Haem peroxidase superfamily signature 105 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 SUPERFAMILY Heme-dependent peroxidases 18 140 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte16g01383 181 ProSiteProfiles Plant heme peroxidase family profile. 28 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01383 Pte-Chr16 33241390 33247790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01383 14 125 Peroxidase AT5G06730 31.148 4.52e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01383 K00434 - cave:132188992 206.068