Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g01366 | ATGGATCAGTATTCTGGTAAAAGAGCTATTGATGGAGTGATACTCCCCAGAAAGGGCCCTGGTCAGGTTTTTGGAGATGCCGTCAACAAAAGGGATCAAAATCCTCAACTTTGCAATGGACTTGGTTGCAACGAAAGAGTCAACTCCCAGAAAGATGTCCAAACTGGTTATTTTGAAAAGGGTAAATCCCTGATGCCATCGGTTCGTTCCTCTTCAAGTGGTAAAGAAGCAATTGGAACTTGTTCTAAAGCTTATTGTAGTTCAAGTAACCCAAGAAAATCCTTGACTGCAGAAAGGAAAACACTTTACTCGCATTTAGAAACAGATTCATCTGAAACTAGTAGTTTGCAAGATGAACCAGAAGGTTTGGAGCTCATTCCTACACCTGAGAAAATTCAGAGAGGCCTTCGAGCTGAATCTAAAAATGTAGAGTCAAGAAATGCTATCATAATTGGTTCTAGTGTTGCATCAAATGTCAGTTCACCTAGGAACTTAAATGAAAGAAATGGATTGCAAAGTCTAGATGCAGTAGCAGGTAATTCTCTTTCTCTGGGCTCTAGAAGAACCGACCATTCGACAAATGTTGGTAGTAATAAATCTGGTTTGAAGAACTTAAGATGCAATTCAGATGCTATCCCCCCAGGTTATTCATCTTCAGAGTCAAACCTCAATAGAAGGAAAGATATCATAAAGAAAAGAAATGCTGGGGGAGAAAGTAGCTCTAAGTCTCGAGGGAAGAAGATAATTGATTCAGCATCAGAAGCGTGGAAGGCTAGTTCCCGAAATGGAATTTCTATCAATGAGATAAGGCGATCTGGAAATACTCCTCCCAACAGGGATAATGCAGTGACCTCAGCTAGGAGTAGGCGAACAAATAAAGGTCATACTAGAGCTAGGCTCTCGAATCAAGGAAATGAAAGCTCCATCTCTTCTAATGATACCACTCTTGTAACATCACCCGTGTCTGATCCTGATGACCTTAGTTCTTCTGCTTTATCACTTCATTTACCTTCAGAGACTTCCACAGGTCATCCAAATTCTTTCAGTAGACCTGGAAATAGCAGTGAGCGCATATTTACTATTATGCCTACCTGTTCTGGTGAAGTTTTCAGTACTCATTCTTTGGTGAATCCAGATAACGTTAGAAGATTTAATATAGATGGAATTGCAGAGGCGTTGCTGGCTTTTGAGAGGTTTGATCAAGAAGAAGCACGGGCGTACGATCAAATGCGAATTCTGGGGACAAACATGTTCCGTAATAGTCTAACATTGTACGATCGGCATCAGGACCTAAGGCTGGATATTGATAATATGACATATGAGGAATTGTTAGCTCTTGAAGAGAGGATGGGCACTGTTAGCACAGCACTTACCGAGGAAATATTAGCAGAATCTCTGAAGGAAAGCATTTATCAATCTTCACCATCAGATGATGTAACTGAGGGTTGTGATCATGGGGATAATGATGATATCAAATGCAGCATCTGCCAGGAAGAATATATGGTGGGAGATGAAGTTGGCAATTTACAATGTGAGCATATGTATCATATAGACTGCATCCAGCATTGGCTGCGGTTGAAAAATTGGTGTCCAATATGTAAAGCACCAGCTGCACTCTCAAGATCTGTTCCAGTCATCAGGTGA | 1644 | 0.4088 | MDQYSGKRAIDGVILPRKGPGQVFGDAVNKRDQNPQLCNGLGCNERVNSQKDVQTGYFEKGKSLMPSVRSSSSGKEAIGTCSKAYCSSSNPRKSLTAERKTLYSHLETDSSETSSLQDEPEGLELIPTPEKIQRGLRAESKNVESRNAIIIGSSVASNVSSPRNLNERNGLQSLDAVAGNSLSLGSRRTDHSTNVGSNKSGLKNLRCNSDAIPPGYSSSESNLNRRKDIIKKRNAGGESSSKSRGKKIIDSASEAWKASSRNGISINEIRRSGNTPPNRDNAVTSARSRRTNKGHTRARLSNQGNESSISSNDTTLVTSPVSDPDDLSSSALSLHLPSETSTGHPNSFSRPGNSSERIFTIMPTCSGEVFSTHSLVNPDNVRRFNIDGIAEALLAFERFDQEEARAYDQMRILGTNMFRNSLTLYDRHQDLRLDIDNMTYEELLALEERMGTVSTALTEEILAESLKESIYQSSPSDDVTEGCDHGDNDDIKCSICQEEYMVGDEVGNLQCEHMYHIDCIQHWLRLKNWCPICKAPAALSRSVPVIR* | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g01366 | 547 | SMART | ring_2 | 493 | 533 | IPR001841 | - | |
Pte16g01366 | 547 | FunFam | E3 ubiquitin-protein ligase arkadia | 454 | 539 | - | - | |
Pte16g01366 | 547 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 69 | 537 | IPR045191 | GO:0061630 | |
Pte16g01366 | 547 | MobiDBLite | consensus disorder prediction | 183 | 223 | - | - | |
Pte16g01366 | 547 | MobiDBLite | consensus disorder prediction | 266 | 355 | - | - | |
Pte16g01366 | 547 | ProSiteProfiles | Zinc finger RING-type profile. | 493 | 534 | IPR001841 | - | |
Pte16g01366 | 547 | MobiDBLite | consensus disorder prediction | 297 | 355 | - | - | |
Pte16g01366 | 547 | Pfam | Ring finger domain | 492 | 534 | IPR001841 | - | |
Pte16g01366 | 547 | MobiDBLite | consensus disorder prediction | 266 | 289 | - | - | |
Pte16g01366 | 547 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 454 | 538 | IPR013083 | - | |
Pte16g01366 | 547 | MobiDBLite | consensus disorder prediction | 183 | 225 | - | - | |
Pte16g01366 | 547 | SUPERFAMILY | RING/U-box | 487 | 539 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g01366 | Pte-Chr16 | 33095902 | 33099935 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g01366 | 374 | 537 | C3H Transcription Factor Family | AT2G15530 | 41.818 | 3.91e-33 | 132 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g01366 | - | - | cave:132190258 | 547.354 |