Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01363 ATGGCTCTTGACCTCGTGGGTTTTCAGAAAATGGATGAGCAGATGGCCATACAAGAGGTTGCTTCTCAAGGCATCAAAAGCATGGAACACCTCATTCGCGTTATGTCTCATCAATCTTCTTCCGACTGTGCCAATCTCACCGACGTTACCGTCTCCAAGTTCAAAAGCGTCATTTCCCGTTTAAAACGATCGGGTCATGCCCGGTTCAGACGGGGACCGGTCTCTGCAGCTTCTTCTTCTTCGTTGACCATATATCCTCCTACATTAGCTTCTCCTTCAACCTCTGCTTTTCTGCCTGCAGTCTCTCGGCCGGAAGCGCAAGACCAAAGCCAACAGCGAACTCCGTCTGTACCAGCCAGTTTTGCTCCGGTATCGTTTGCTTCTCCACCGAAGATCATAACTCCGGTACCCGTTCATCACGCTGCTATCTCGGCTCCTCCAACCTTCGTCTCGCCTCAACCTCAAAGTGTGATTTATTTCACTAGACCTAACATTTTTCCCACGAAAGGAAAAACCACAGAGCTAGAGTTCATCCCGAAAGATAACTTCAGCGTTTCATCGAATTCATCGTTACTCTCTTCTGCCATCACCGGAGACGGCAGCGTCTCAAATGGGAAGCAGGGGTCATCGCTCTTCCCGGCCCTTCCTGCTCCGACTACTTCTAACGGGAAACCACCGTTATCGTCCGCTCCACCGAAGAAACGATGCCATGTCCACCATGAACACTGGGACGACATCTCCAGCGAGATCTCTGGCTCCGTAAAATGCCACTGCGTCAAGAAAAGGAAAGGTGGAATAAAGAAAAGGATCAGAGTGCCGGCGATGGGTCCAAAAGTTGCCGATATCCCAGGTGATGAGTATCCGTGGAGGAAGTACGGTCAAAAACCAATCATGGGATCACCATACCCTCGAGGGTATTACAGATGCAGTGCAGCTAGGAGGTGTCCGGCAAGGAAACACGTGGAACGTGACAAAGACGATCCAACGATGTTGATTGTGACTTACGAGGGGGAGCACCTGCATGCTGCTCAAAATATGGCCGGCGCAACGGATTTGGTGCTTGACTCTTAA 1071 0.5051 MALDLVGFQKMDEQMAIQEVASQGIKSMEHLIRVMSHQSSSDCANLTDVTVSKFKSVISRLKRSGHARFRRGPVSAASSSSLTIYPPTLASPSTSAFLPAVSRPEAQDQSQQRTPSVPASFAPVSFASPPKIITPVPVHHAAISAPPTFVSPQPQSVIYFTRPNIFPTKGKTTELEFIPKDNFSVSSNSSLLSSAITGDGSVSNGKQGSSLFPALPAPTTSNGKPPLSSAPPKKRCHVHHEHWDDISSEISGSVKCHCVKKRKGGIKKRIRVPAMGPKVADIPGDEYPWRKYGQKPIMGSPYPRGYYRCSAARRCPARKHVERDKDDPTMLIVTYEGEHLHAAQNMAGATDLVLDS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01363 356 Pfam Plant zinc cluster domain 233 281 IPR018872 -
Pte16g01363 356 SUPERFAMILY WRKY DNA-binding domain 281 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte16g01363 356 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte16g01363 356 MobiDBLite consensus disorder prediction 198 236 - -
Pte16g01363 356 Pfam WRKY DNA -binding domain 285 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte16g01363 356 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte16g01363 356 Gene3D WRKY domain 273 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte16g01363 356 MobiDBLite consensus disorder prediction 198 227 - -
Pte16g01363 356 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 344 IPR044810 GO:0003700
Pte16g01363 356 FunFam WRKY transcription factor 65 267 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01363 Pte-Chr16 33078499 33080116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01363 1 346 WRKY Transcription Factor Family AT2G24570 51.412 7.58e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte16g01363 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01363 - - qsa:O6P43_019342 382.104