Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01359 ATGGCTACCAGTAAATCATGTTACTGTTGCCTCCTCACTCTTTTCACATTACAAGTTATTTCATCTTTTGCGCCATCGTTTGGTGATACGGACAGTCAAATCCTCCTTCGCTTCAAGGCATCATTGGCAAACAACACTGCGTTGAGCAACTGGGATGAATCTACAAGCATTTGTGATTGGACAGGCGTACTATGCCCTAAAGGTGCGTTTCATGGCTTGAGGCTTGAGAACATGGGGCTAGCCGGTGTGCTTGACTTGAACAGCTTACAACAATTGACAAGCTTGAGAAGCTTCAGTCTCGTCAACAATAACTTTGAAGGTCCAATGCCTGCAATCAACAAGATTGGCAGGCTGAGAGCCTTGTTTTTATCCAACAACAAGTTCTCAGGTGAAATCCCCAATGATGCTTTTCTGGGTATGCGTAGCTTGAAGAAGGTTTACTTGGATGGAAATGGATTCACAGGATACATTCCTGCATCTCTAGCGGACTTGCCTACACTCATTGAATTGGACCTTGGGAACAACCATTTCCAAGGCCAGATTCCAGATTTTCATCAGCAGTTCAGGTTTTTCAACTTAGCCAACAATCAGCTGGATGGTCCCATTCCAGAAAGCTTAAGCAACATAAATCCAAGCTCATTTACTGGTAACATTGGCCTTTGTGGAAAACCACTAGGGCCGTGTATTACTCCGAAGCCCAATAAACATTTTAACCACAAAGCTACTCTCATTGTTGTGATCGTTGTCGTTTTGTCTTTATCAATAATCGCTGCCTCAATTATCTACTTACGAGGCTGGTGGGCTCAGGATTCACAAAGCAAACAATCAGCCCAAAAGTTTGGAGCCCACGAGAAATCGATTGACATCGTTCCTGAAGGCCCGAAAGAAACCCAGTCCGATTACTACTCTGGTGGCTACAAGAAAAGCAACGACGGTGCTCTGAAGTTTGTCAGAGAAGACAGACAGAAATTTGATATGCAAGAATTGCTTAGAGCCTCAGCTCAAGTCTTGGGTAGCAGCAGCTTCGGATCAAGCTACAAGGTTATGGTGTCAAATGGGGATGCTTTGGTTGTGAAGCGGTTTAAGCACATGAACAACGTTGGCAAGCAAGAGTTCTACGACCACATGAAAAAGCTAGGAAGGTTGTCACATCCAAACATCCTTCCTCTTGTTGCATTCTACTACAGAAAAGAAGAGAAGCTTTTGATTTATGACTACGTTGATAATGGTAGCTTGGCTAGTCATCTCCACGCAAGGCGTGCTCCGGGTGAAGCAGGTCTGGACTGGCCAACTAGGTTGAAGGTTATCAAAGGTGTAGCAAGGGGGTTAGCTTATCTATACAATGAATTCCCAAGCGAAATGCTTCCACATGGTCATCTGAAATCATCTAACGTGATATTGGATCAGAATTTTGAACCAAAGTTGACAGAGTACACACTTGTTCCTGTGATGAGCAAGAACCATGCCCAGCAAAACATGGCAGCCTACAAGTCTCCAGAGGCCACTGAAAACGAGCAAGTGACAAGAAAGACGGACGTGTGGTGCCTGGGGATTCTAATTCTTGAGTTGTTGACAGGGAAGTTCCCATCAAACTATTTGAGACATGGTAAAGGGGGTAGTGCAGATTTGGCTGCATGGGTGAACTCAGTGGTGATGGAGGAGTGGACTGGGGAGGTGTTTGATAAAGACATGGTGAAGGGAACAAAGAGTGGTGAAGGTGAGATGCTGAAGCTGTTGAAGATTGGAATGAAGTGTTGCGAATGGGGTTGGGAAGGAAGGTGGGATTGGAGAGACGCAGTGGGGAAGATTGAAGAGTTGAAAGAGAAAGATAATGAAGACTATTCGTCTTATTTGAGTGAAGGTGATTTTTCAAGGGCAATGACTGAGGAAGACATCCCTGTCTCAGTTGCCACCACCAATGGTGAGTGA 1929 0.4484 MATSKSCYCCLLTLFTLQVISSFAPSFGDTDSQILLRFKASLANNTALSNWDESTSICDWTGVLCPKGAFHGLRLENMGLAGVLDLNSLQQLTSLRSFSLVNNNFEGPMPAINKIGRLRALFLSNNKFSGEIPNDAFLGMRSLKKVYLDGNGFTGYIPASLADLPTLIELDLGNNHFQGQIPDFHQQFRFFNLANNQLDGPIPESLSNINPSSFTGNIGLCGKPLGPCITPKPNKHFNHKATLIVVIVVVLSLSIIAASIIYLRGWWAQDSQSKQSAQKFGAHEKSIDIVPEGPKETQSDYYSGGYKKSNDGALKFVREDRQKFDMQELLRASAQVLGSSSFGSSYKVMVSNGDALVVKRFKHMNNVGKQEFYDHMKKLGRLSHPNILPLVAFYYRKEEKLLIYDYVDNGSLASHLHARRAPGEAGLDWPTRLKVIKGVARGLAYLYNEFPSEMLPHGHLKSSNVILDQNFEPKLTEYTLVPVMSKNHAQQNMAAYKSPEATENEQVTRKTDVWCLGILILELLTGKFPSNYLRHGKGGSADLAAWVNSVVMEEWTGEVFDKDMVKGTKSGEGEMLKLLKIGMKCCEWGWEGRWDWRDAVGKIEELKEKDNEDYSSYLSEGDFSRAMTEEDIPVSVATTNGE* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01359 642 ProSiteProfiles Protein kinase domain profile. 331 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01359 642 SUPERFAMILY Protein kinase-like (PK-like) 335 605 IPR011009 -
Pte16g01359 642 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Pte16g01359 642 Pfam Protein kinase domain 334 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01359 642 MobiDBLite consensus disorder prediction 285 304 - -
Pte16g01359 642 SUPERFAMILY L domain-like 48 210 - -
Pte16g01359 642 Gene3D Transferase(Phosphotransferase) domain 1 407 627 - -
Pte16g01359 642 FunFam Pollen receptor-like kinase 1 407 617 - -
Pte16g01359 642 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Pte16g01359 642 Gene3D Phosphorylase Kinase; domain 1 299 406 - -
Pte16g01359 642 FunFam Nuclear pore complex protein NUP107 28 183 - -
Pte16g01359 642 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Pte16g01359 642 Gene3D Ribonuclease Inhibitor 188 229 IPR032675 -
Pte16g01359 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 613 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01359 Pte-Chr16 33036934 33039997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01359 17 630 Receptor kinase-like Gene Family AT4G31250 48.255 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte16g01359 Pkinase 7.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01359 - - qsa:O6P43_019333 746.117