Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01349 ATGTCAGTCTTAGTTCATGAAGATAAGTGTTCTTTAGTGGAATCGAAGGGAGGTGGTAGAAAGGGAAATGCACTTTCTATAACCTGCGAATCCGATTCAAATGCAGCAAAATGCTATCTGGGAGTCGAGCTATTGAAATGCGAAGGTAGTGAATCCATCCTCAAATCCCTTTGGCTTCATTCGGATGCGATCATGTGCTGCTCTCTCAAGCCATTGCCCGTTTTTACATTTGCAAATCAAGCCGGACTTGACATGCTGGAGACAACATTGGTTGCTCTTCAAGACATTACACTGGAAAAGATCTTTGATGATAATGGAAAGAAAACACTGTGCTCTGAGTTCCCACAGATTATGCAACAAGGTTTTATGTGCCTTCAAGGTGGTATATGCTTATCCAGCATGGGAAGGGCCTGTGTCTTACGAGAGAGCAGTGGCCTGGAAAAGTATTGA 450 0.4333 MSVLVHEDKCSLVESKGGGRKGNALSITCESDSNAAKCYLGVELLKCEGSESILKSLWLHSDAIMCCSLKPLPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCLQGGICLSSMGRACVLRESSGLEKY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01349 149 Pfam MEKHLA domain 39 140 IPR013978 -
Pte16g01349 149 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 36 137 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01349 Pte-Chr16 32961397 32963150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01349 33 145 Homeobox Transcription Factor Family AT4G32880 73.913 1.52e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01349 K09338 - qsu:112029705 195.667