Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01346 ATGCCTGAGCTGCGTCCCAGACCACGCAGAAACTGGGCTTTGAATAACCCAAACGCGGCTGTGCAACCGCAAAAGCAGTCTGTCGTACAAGGCCGTGAAAGGAGGAAGACTGTTAAGGCCGTACCAAGCAGGAAGAATCTGAAGCGGAGTAATAGCCAGAACCTGAAGCACAAGAAGACGATCATTTTGAAAAAGACAAACAATATCCTATTGAACAAGGGTGTCGGTGCTGTGGTCGAAGCTAAAGATAAGCAGAGAGAGGCAATATCTGAGGTGCGGGTAAGGCTTCCGCGAGAAGAAAAAGAAGAAGTTGCTGAGAGAGCTATGGATGAGTACGATAGTGGTGGTCGGAGCGCAGATAAGGGTCCTGCGGCTGACGACGAGGGTACTCCAGCTCCTCTTCCTGAAAAGGTAACTGTTGGCGGTTCCCCAGTATACAAACTAGATAGGAAGCTGGGAAAAGGGGGCTTTGGACAAGTTTACGTTGGTCGTAGAGTTGGACCTTGCAGTACAAGTGAACGAACTGGACCAGGGGCAGTGGAGGTGGCTTTAAAATTTGAGCATAGAAGCAGTAAAGGTTGCAATTATGGACCACCATACGAATGGCAAGTTTACAATGCCCTTGGAGGTAGTCACGGGGTTCCAAGAGTTCATTACAAGGGACGCCATGGTGATTATTATATTATGGTCATGGATATGCTTGGTCCAAGTCTTTGGGATGTGTGGAATAACAATTCTCATACGATGTCAATTGAAATGGTTGCATGTATTGCTATCGAGGCAATTTCCATATTGGAGAAAATGCATTCCAGGGGGTATGTGCATGGTGATGTGAAACCTGAGAATTTCTTGCTTGGCCCACCTGGCACTTCTGACGAGAAAAAGCTATTTCTTGTTGACCTTGGATTAGCCACCAGGTGGCGTGATAGTTCAACTGGTCTGCATGTTGAGTATGATCAACGTCCAGATGTATTCAGGTGCATGAATTATTTTGGAGTTATATTCTCAATCTATTTAGCTAGCTTTGGGAGGCTTAGTTTCCTTGGTTGCTACAGGGGAACAGTTCGCTATGCTAGTGTGCATGCTCATCTTGGTAGGACGGGTAGCAGGAGGGATGACTTAGAGTCACTTGCCTATACCCTTATCTTTCTTCTTCGCGGTCGGTTGCCTTGGCAAGGATACCAGGGAGAAAATAAAGGGTTTCTTGTGTGCAAGAAAAAAATGGCCATTTCGCCAGAGACCTTATGCTGCTTTTGCCCTCAACCATTCCGGCGATTTGTCGAATATGTGGTGAATCTCAAGTTTGATGAAGAACCCAATTATGCAAAATATATCTCTCTATTTGATGGCATTGTTGGACCAAATCCAGATATTAGGCCAATAAACACGGAAGGTGCTCAAAAGCTTATATGTCTGGTGGGACAGAAGAGAGCTCGATTAACATTAGAGGATGAGGATGATGAACAACCAAGGAAGAAGGTTAGAATGGGCATGCCTGCAACACAATGGATCAGTGTATACAGTGCTCATCGGCCAATGAAACAAAGGTATCACTACAATGTTGCTGATGTAAGATTGACCCAGCATATTGAAAAAGGGAATGAAGATGGGTTGTTTATCAGTAGTGTTGCATCCTGTTCAAACCTTTGGGCACTTATTATGGATGCTGGCACTGGCTTTACTTCTCAAGTCTATGACCTTTCACCATTCTTTCTTCACAAGGAGTGGATAATGGAACAATGGGAGAAAAACTATTACATCAGTGCCATAGCAGGAGCCAACAATGGTAGCTCATTGGTCGTGATGTCAAAAGGGACCCCATATTTACAACAGTCATATAAAGTAAGTGATTCATTTCCATTCAAGTGGATCAACAAGAAATGGAGGGAAGGATTTTATGTCACTGCTATGGCAACTGCTGGAAGTAGATGGGCTATTGTTATGTCTCGCGGTGCTGGCTTTTCAGATCAGGTTGTGGAACTTGATTTTCTGTATCCGAGTGAAGGAATTCATAGAAGGTGGGACAGTGGATACCGTATCACCTCAACTGCTGCAACGTGGGATCAAGCTGCTTTTGTCCTTAGTGTACCCAGACGAAAGCCTGCTGACGAAACTCAAGAGACTCTCCGAACTTCTGCTTTTCCTAGTACGCATGTCAAGGAGAAATGGGCTAAAAACCTTTATATTTCATCCATCTGCTATGGTAGAACAGTTTCATAA 2220 0.4464 MPELRPRPRRNWALNNPNAAVQPQKQSVVQGRERRKTVKAVPSRKNLKRSNSQNLKHKKTIILKKTNNILLNKGVGAVVEAKDKQREAISEVRVRLPREEKEEVAERAMDEYDSGGRSADKGPAADDEGTPAPLPEKVTVGGSPVYKLDRKLGKGGFGQVYVGRRVGPCSTSERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRHGDYYIMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRCMNYFGVIFSIYLASFGRLSFLGCYRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMAISPETLCCFCPQPFRRFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICLVGQKRARLTLEDEDDEQPRKKVRMGMPATQWISVYSAHRPMKQRYHYNVADVRLTQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTSQVYDLSPFFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTPYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYISSICYGRTVS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01346 739 Gene3D Transferase(Phosphotransferase) domain 1 116 455 - -
Pte16g01346 739 MobiDBLite consensus disorder prediction 100 140 - -
Pte16g01346 739 MobiDBLite consensus disorder prediction 1 54 - -
Pte16g01346 739 CDD STKc_CK1 146 448 - -
Pte16g01346 739 ProSiteProfiles Protein kinase domain profile. 146 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01346 739 MobiDBLite consensus disorder prediction 100 124 - -
Pte16g01346 739 Pfam Protein kinase domain 146 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01346 739 SUPERFAMILY Protein kinase-like (PK-like) 146 449 IPR011009 -
Pte16g01346 739 SMART serkin_6 146 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01346 739 ProSitePatterns Protein kinases ATP-binding region signature. 152 185 IPR017441 GO:0005524
Pte16g01346 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Pte16g01346 739 PANTHER CASEIN KINASE-RELATED 139 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01346 Pte-Chr16 32924199 32930442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01346 145 308 EF-hand Containing Proteins AT2G17290 29.341 3.53e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pte16g01346 Pkinase 6.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01346 - - csv:101218249 1152.89