Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01340 ATGAAAGTCCTCTCCCCCTTCTACTTTCCGTTGTGGGGCCTCTTCATCTACCATCTCTCTCTCTCTCCAACCCCACCCCCCAAAACAAAATTATATTTCAATAAACTTTCTCCCTCAAAGCCTCTGTCCAGTGACTTTCGGCATCGCTCTCTCATGGCGATTGCTGCAGAGACCCAACCACAAGACAAGAATACTTCAGAGACTTCAGCTGTCGAGAAAAGAAGATGGACACTCAATGACTTTGATATTGGAAAGCCTCTGGGTAGGGGAAAGTTTGGCCACGTCTATTTAGCAAGAGAAAAGAGGAGCAACCATATTGTTGCTCTTAAAGTCCTCTTTAAGAGCCAACTGCAGCAATCTCAGGTTGAGCATCAGCTTCGGAGGGAAGTTGAAATACAAAGTCATCTGCGACATCCAAACATTTTACGCCTTTATGGTTACTTCTACGATCAGAAACGAGTCTATTTGATTTTGGAACATGCTCCCCAAGGTGAACTTTACAAGGAACTACAAAAGTGCAAATACTTCAGTGAAAGACGTGCAGCTACTTATGTTGCGTCATTAGCACGAGCCCTCATATATTGCCATGGAAAGCATGTGATTCATAGAGACATCAAACCAGAGAACCTTCTCATCGGTGCACAGGGTGAACTGAAGATAGCAGATTTTGGATGGTCAGTGCACACATTTAATCGCAGGAAGACCATGTGTGGTACACTAGATTACCTCCCTCCTGAGATGGTCGAAAGTGTAGAGCATGATGCAAGTGTGGACATATGGAGTCTTGGTGTTCTCTGCTATGAGTTTCTCTATGGACTACCCCCTTTCGAGGCTAAGGAACATTCTGATACCTATAGAAGGATAATTCGAGTTGATCTCAATTTTCCTCCAAAACCCATCGTCTCTTCTGCTGCAAAGGATCTCATTACTCAAATGCTTGTGAAGGATACATCACAACGTCTGCCTTTAGACAAACTTCTTGAACATCCATGGATCGTTCAGAACGCAGAGCCCTCGGGTATATAG 1026 0.4415 MKVLSPFYFPLWGLFIYHLSLSPTPPPKTKLYFNKLSPSKPLSSDFRHRSLMAIAAETQPQDKNTSETSAVEKRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEHAPQGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRKTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGLPPFEAKEHSDTYRRIIRVDLNFPPKPIVSSAAKDLITQMLVKDTSQRLPLDKLLEHPWIVQNAEPSGI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01340 341 SUPERFAMILY Protein kinase-like (PK-like) 69 335 IPR011009 -
Pte16g01340 341 Gene3D Phosphorylase Kinase; domain 1 68 164 - -
Pte16g01340 341 SMART serkin_6 81 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01340 341 FunFam serine/threonine-protein kinase Aurora-1 165 340 - -
Pte16g01340 341 CDD STKc_Aurora 80 333 - -
Pte16g01340 341 FunFam Aurora kinase A 73 164 - -
Pte16g01340 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pte16g01340 341 ProSiteProfiles Protein kinase domain profile. 81 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01340 341 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 59 339 IPR030616 GO:0004672
Pte16g01340 341 Gene3D Transferase(Phosphotransferase) domain 1 165 339 - -
Pte16g01340 341 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Pte16g01340 341 Pfam Protein kinase domain 83 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01340 Pte-Chr16 32891959 32894700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01340 72 338 CBL-interacting serine-threonine protein kinases AT5G10930 36.131 5.77e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pte16g01340 Pkinase 1.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01340 K08850 - qsa:O6P43_015468 569.311