Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01334 ATGGATCGTCTCTGTGGTTTCTTTATCATCGGATTAATCATTTCAATGTCTTACTTTGCTGAAGCCACAAACAATGACTCGCAGTCTCAGTTTTTTTCTCAGATGAAGGAGTCCCTTACAGGTTACGCTTTGTCCGCATGGGATATGACTGGTGGGAAACCAGTCTGTAATTTTTCTGGGGTGACCTGCAATGATCAAGGCATTGTGGTCGGAATCGATATCGATAGATGGTCACTCTCTGGAAAATTCCCCAATGGCATATGCTTGTACTTGCCCGAGTTGAGAGTTCTCCGTCTTAGCCACAATAGCTTCAAGGGTGATTTCATGGACAGCATAACGAACTGCTCCAATTTGGAAGAGCTTGACATGAATCACATGTATCATAGAGGAACACTGGGGGATTTTTCGCCTCTTAAGTCTCTTCGAATCCTTGACATGTCGTATAATTACTTTTCTGGTCAATTCCCCATGTCAGTGTTCAATCTCAGCAATCTGGAAGTACTTAACTTCAACGAAAACAGTGGTTTTAAGTTATGGGAATTACCGGAAAATATGTTCAGGCTATCCAAGCTGAAACGTATGGTATTGACAACATGCATGATCCGTGGAATAATCCCAACAACCATAGGAAACATGACGTCCCTTGTAGATCTTGAGTTAAGTGGCAATTTGCTTAGGGGTCCGATTCCTGTAGAGATTGGATTGCTGAAAAACTTGCAGCAGCTTGAGCTCTACTACAATTACCAACTTCGTGGAAGTATCCCTGAGGAACTTGGAAATCTCACAGAGCTTAGAGATTTGGATATGTCAGTCAACAAGTTCACGGGAAAGATACCGGAATCCATATGTCGCCTCCCTAAGCTTGAAGTCTTGCAGCTATACAACAATAGCCTCACAGGAGAAATACCAAGTGTAATAGCAAATTCAACCACCTTGAGAATCCTCTCACTTTATGACAATTACCTGACTGGTGAAATTCCAATGAGTCTCGGTCTGTCATCGCCGCTGATGGCTCTAGACGTGTCGGAAAATCAGCTCTCAGGTCCACTTCCCGCAGAGGTCTGCTATGGAGGTAAACTGCTCTATTTTCTTGTTCTGCAAAATAAATTTTCTGGACAATTATCCAAGAATTATGCAAAATGCGAGACTCTCTTGAGGTTTCGAGTGAGTTATAACCATTTGGAAGGGCCAATACCAGCAGGCCTTCTTGGTCTACCTCATGTCGCTATTATCGATTTGGCTTACAACAATTTCACTGGTCCACTAGATAATTCAATTGGAAATTCAAGAAACCTATCTGAGCTATTCCTACAAAAGAACATAATTACTGGCGTCATACCTCCTGAAATCTCACTTGCCAACAATCTGGTAAAGATTGATCTCAGTAACAATCTTCTGTCTGGTCCAATACCTTGTGGAATTGGCAACCTAAAGAAGCTCAACTTACTTATGCTGCAAGCCAACAAGCTTAAATCTTCCATCCCTGACTCACTTTGTTCACTAAAATCTCTTAATGTTCTTGACCTCTCCAACAACCTTCTATCTGGTAATATCCCAGAACGTATCTCTGAACTTTTGCCTAACTCCATCAACTTCTCGAGAAATTCTCTCTCTGGTCCAATTCCTTTCTCATTACTAAAAGGAGGGTTGGTAGAAAGCTTATCAGGTAATCCAGGTCTCTGTGTTCCTGCGTATATCAATACCTCAGTTCAAAATTTTCCCATATGCCCCCAGACTGATAAGAAAAGAAGGCTTGACTCTATCTGGGCAATTGGTCTTTCTGTCATCATAATCATTGTTGGAGCTGCCTTGTTTGTGAAACGTAGGCTTAACAGAGATAGAGCTTCTGTGGAACATGATGAGACAATGTCCTCATCCTTCTTCTCCTATGATGTCAAGAGTTTCCACAAGAGAACTTTTGACCAAAAGGAGATCATCGACGCAATGGTGGATAAGAACATAGTAGGGCACGGTGGTTCAGGCACAGTGTACAAGATTGAATTGAAAAGTGGTGAGTTTATCGCAGTGAAGAGATTATGGAGCCGAGGACCAAAGGATCACACATCTATAGAGGATCAGCTTGTTTTGGACAAGGAGCTGAAAACTGAGGTTGAGACCTTGGGAAGTATAAGACATAAGAACATAGTCAAACTGTATTGCTTCTTCTCAGGTTTCAACAGCAGCCTGTTGGTTTATGAGTACATGCCAAATGGTAATCTCTGGGATGCAATCCACAAAGGACCAGTCCACTTGGATTGGCCTACTCGCCATCAGATTGCAATAGGGGTTGCACAAGGACTAGCATACCTTCACCATGATTTGCTTCGTCCCATTATTCACAGAGACATCAAGTCATCTAATATCCTGCTAGATGTAAATTACCAGCCTAAAGTTGCAGACTTTGGCATAGCCAAGGTTTTACAAGCAAGAGGAGGCAAGGACTCCACCACCACTTTCATTGCAGGCACATATGGTTACTTAGCCCCAGAATACGCTTATTCCTCAAGAGCAACAACCAAGTGTGACGTGTACAGCTTTGGGGTTATCTTAATGGAGTTGATAACTGGGAAGAAACCTGTAGAGGCAGAGTTTGGAGAGAACAGGAACATTGTGTATTGGGTTTCCAACAAAGTGGACACAAAAGAAGGAGCTGCAGAGGTATTGGACAAGAGATTATCAGGTTCTTTCAGAGATAAGATCATACAAGTACTACGCATTGCGATTCGGTGTACTTACAAGGCCCCATCTCTTCGACCAACAATGAAAGAGGTCGTTGAATTGCTGACTGAGGCCGATCCATTCAGATGCCACTCTTTGAACAAAAGTTGTCACAAAGAAGAAGCACAATGA 2850 0.4246 MDRLCGFFIIGLIISMSYFAEATNNDSQSQFFSQMKESLTGYALSAWDMTGGKPVCNFSGVTCNDQGIVVGIDIDRWSLSGKFPNGICLYLPELRVLRLSHNSFKGDFMDSITNCSNLEELDMNHMYHRGTLGDFSPLKSLRILDMSYNYFSGQFPMSVFNLSNLEVLNFNENSGFKLWELPENMFRLSKLKRMVLTTCMIRGIIPTTIGNMTSLVDLELSGNLLRGPIPVEIGLLKNLQQLELYYNYQLRGSIPEELGNLTELRDLDMSVNKFTGKIPESICRLPKLEVLQLYNNSLTGEIPSVIANSTTLRILSLYDNYLTGEIPMSLGLSSPLMALDVSENQLSGPLPAEVCYGGKLLYFLVLQNKFSGQLSKNYAKCETLLRFRVSYNHLEGPIPAGLLGLPHVAIIDLAYNNFTGPLDNSIGNSRNLSELFLQKNIITGVIPPEISLANNLVKIDLSNNLLSGPIPCGIGNLKKLNLLMLQANKLKSSIPDSLCSLKSLNVLDLSNNLLSGNIPERISELLPNSINFSRNSLSGPIPFSLLKGGLVESLSGNPGLCVPAYINTSVQNFPICPQTDKKRRLDSIWAIGLSVIIIIVGAALFVKRRLNRDRASVEHDETMSSSFFSYDVKSFHKRTFDQKEIIDAMVDKNIVGHGGSGTVYKIELKSGEFIAVKRLWSRGPKDHTSIEDQLVLDKELKTEVETLGSIRHKNIVKLYCFFSGFNSSLLVYEYMPNGNLWDAIHKGPVHLDWPTRHQIAIGVAQGLAYLHHDLLRPIIHRDIKSSNILLDVNYQPKVADFGIAKVLQARGGKDSTTTFIAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDTKEGAAEVLDKRLSGSFRDKIIQVLRIAIRCTYKAPSLRPTMKEVVELLTEADPFRCHSLNKSCHKEEAQ* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01334 949 Gene3D Phosphorylase Kinase; domain 1 632 734 - -
Pte16g01334 949 FunFam receptor protein-tyrosine kinase CEPR1 632 734 - -
Pte16g01334 949 SUPERFAMILY Protein kinase-like (PK-like) 637 928 IPR011009 -
Pte16g01334 949 FunFam Receptor protein-tyrosine kinase CEPR1 285 570 - -
Pte16g01334 949 SMART LRR_typ_2 501 525 IPR003591 -
Pte16g01334 949 SMART LRR_typ_2 285 309 IPR003591 -
Pte16g01334 949 SMART LRR_typ_2 212 236 IPR003591 -
Pte16g01334 949 SMART LRR_typ_2 162 188 IPR003591 -
Pte16g01334 949 SMART LRR_typ_2 477 500 IPR003591 -
Pte16g01334 949 SMART LRR_typ_2 91 115 IPR003591 -
Pte16g01334 949 PRINTS Leucine-rich repeat signature 501 514 - -
Pte16g01334 949 PRINTS Leucine-rich repeat signature 336 349 - -
Pte16g01334 949 Gene3D Ribonuclease Inhibitor 25 303 IPR032675 -
Pte16g01334 949 Gene3D Transferase(Phosphotransferase) domain 1 735 943 - -
Pte16g01334 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Pte16g01334 949 Pfam Protein kinase domain 651 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01334 949 SMART serkin_6 649 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01334 949 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 218 - -
Pte16g01334 949 SUPERFAMILY L domain-like 248 566 - -
Pte16g01334 949 FunFam Leucine-rich repeat receptor-like protein kinase 178 281 - -
Pte16g01334 949 FunFam leucine-rich repeat receptor-like protein kinase TDR 735 939 - -
Pte16g01334 949 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Pte16g01334 949 ProSiteProfiles Protein kinase domain profile. 649 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01334 949 SUPERFAMILY RNI-like 72 348 - -
Pte16g01334 949 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Pte16g01334 949 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pte16g01334 949 Gene3D Ribonuclease Inhibitor 304 570 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01334 Pte-Chr16 32835232 32838947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01334 24 933 Receptor kinase-like Gene Family AT5G49660 66.193 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte16g01334 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01334 - - qsa:O6P43_015448 1416.36