Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g01334 | ATGGATCGTCTCTGTGGTTTCTTTATCATCGGATTAATCATTTCAATGTCTTACTTTGCTGAAGCCACAAACAATGACTCGCAGTCTCAGTTTTTTTCTCAGATGAAGGAGTCCCTTACAGGTTACGCTTTGTCCGCATGGGATATGACTGGTGGGAAACCAGTCTGTAATTTTTCTGGGGTGACCTGCAATGATCAAGGCATTGTGGTCGGAATCGATATCGATAGATGGTCACTCTCTGGAAAATTCCCCAATGGCATATGCTTGTACTTGCCCGAGTTGAGAGTTCTCCGTCTTAGCCACAATAGCTTCAAGGGTGATTTCATGGACAGCATAACGAACTGCTCCAATTTGGAAGAGCTTGACATGAATCACATGTATCATAGAGGAACACTGGGGGATTTTTCGCCTCTTAAGTCTCTTCGAATCCTTGACATGTCGTATAATTACTTTTCTGGTCAATTCCCCATGTCAGTGTTCAATCTCAGCAATCTGGAAGTACTTAACTTCAACGAAAACAGTGGTTTTAAGTTATGGGAATTACCGGAAAATATGTTCAGGCTATCCAAGCTGAAACGTATGGTATTGACAACATGCATGATCCGTGGAATAATCCCAACAACCATAGGAAACATGACGTCCCTTGTAGATCTTGAGTTAAGTGGCAATTTGCTTAGGGGTCCGATTCCTGTAGAGATTGGATTGCTGAAAAACTTGCAGCAGCTTGAGCTCTACTACAATTACCAACTTCGTGGAAGTATCCCTGAGGAACTTGGAAATCTCACAGAGCTTAGAGATTTGGATATGTCAGTCAACAAGTTCACGGGAAAGATACCGGAATCCATATGTCGCCTCCCTAAGCTTGAAGTCTTGCAGCTATACAACAATAGCCTCACAGGAGAAATACCAAGTGTAATAGCAAATTCAACCACCTTGAGAATCCTCTCACTTTATGACAATTACCTGACTGGTGAAATTCCAATGAGTCTCGGTCTGTCATCGCCGCTGATGGCTCTAGACGTGTCGGAAAATCAGCTCTCAGGTCCACTTCCCGCAGAGGTCTGCTATGGAGGTAAACTGCTCTATTTTCTTGTTCTGCAAAATAAATTTTCTGGACAATTATCCAAGAATTATGCAAAATGCGAGACTCTCTTGAGGTTTCGAGTGAGTTATAACCATTTGGAAGGGCCAATACCAGCAGGCCTTCTTGGTCTACCTCATGTCGCTATTATCGATTTGGCTTACAACAATTTCACTGGTCCACTAGATAATTCAATTGGAAATTCAAGAAACCTATCTGAGCTATTCCTACAAAAGAACATAATTACTGGCGTCATACCTCCTGAAATCTCACTTGCCAACAATCTGGTAAAGATTGATCTCAGTAACAATCTTCTGTCTGGTCCAATACCTTGTGGAATTGGCAACCTAAAGAAGCTCAACTTACTTATGCTGCAAGCCAACAAGCTTAAATCTTCCATCCCTGACTCACTTTGTTCACTAAAATCTCTTAATGTTCTTGACCTCTCCAACAACCTTCTATCTGGTAATATCCCAGAACGTATCTCTGAACTTTTGCCTAACTCCATCAACTTCTCGAGAAATTCTCTCTCTGGTCCAATTCCTTTCTCATTACTAAAAGGAGGGTTGGTAGAAAGCTTATCAGGTAATCCAGGTCTCTGTGTTCCTGCGTATATCAATACCTCAGTTCAAAATTTTCCCATATGCCCCCAGACTGATAAGAAAAGAAGGCTTGACTCTATCTGGGCAATTGGTCTTTCTGTCATCATAATCATTGTTGGAGCTGCCTTGTTTGTGAAACGTAGGCTTAACAGAGATAGAGCTTCTGTGGAACATGATGAGACAATGTCCTCATCCTTCTTCTCCTATGATGTCAAGAGTTTCCACAAGAGAACTTTTGACCAAAAGGAGATCATCGACGCAATGGTGGATAAGAACATAGTAGGGCACGGTGGTTCAGGCACAGTGTACAAGATTGAATTGAAAAGTGGTGAGTTTATCGCAGTGAAGAGATTATGGAGCCGAGGACCAAAGGATCACACATCTATAGAGGATCAGCTTGTTTTGGACAAGGAGCTGAAAACTGAGGTTGAGACCTTGGGAAGTATAAGACATAAGAACATAGTCAAACTGTATTGCTTCTTCTCAGGTTTCAACAGCAGCCTGTTGGTTTATGAGTACATGCCAAATGGTAATCTCTGGGATGCAATCCACAAAGGACCAGTCCACTTGGATTGGCCTACTCGCCATCAGATTGCAATAGGGGTTGCACAAGGACTAGCATACCTTCACCATGATTTGCTTCGTCCCATTATTCACAGAGACATCAAGTCATCTAATATCCTGCTAGATGTAAATTACCAGCCTAAAGTTGCAGACTTTGGCATAGCCAAGGTTTTACAAGCAAGAGGAGGCAAGGACTCCACCACCACTTTCATTGCAGGCACATATGGTTACTTAGCCCCAGAATACGCTTATTCCTCAAGAGCAACAACCAAGTGTGACGTGTACAGCTTTGGGGTTATCTTAATGGAGTTGATAACTGGGAAGAAACCTGTAGAGGCAGAGTTTGGAGAGAACAGGAACATTGTGTATTGGGTTTCCAACAAAGTGGACACAAAAGAAGGAGCTGCAGAGGTATTGGACAAGAGATTATCAGGTTCTTTCAGAGATAAGATCATACAAGTACTACGCATTGCGATTCGGTGTACTTACAAGGCCCCATCTCTTCGACCAACAATGAAAGAGGTCGTTGAATTGCTGACTGAGGCCGATCCATTCAGATGCCACTCTTTGAACAAAAGTTGTCACAAAGAAGAAGCACAATGA | 2850 | 0.4246 | MDRLCGFFIIGLIISMSYFAEATNNDSQSQFFSQMKESLTGYALSAWDMTGGKPVCNFSGVTCNDQGIVVGIDIDRWSLSGKFPNGICLYLPELRVLRLSHNSFKGDFMDSITNCSNLEELDMNHMYHRGTLGDFSPLKSLRILDMSYNYFSGQFPMSVFNLSNLEVLNFNENSGFKLWELPENMFRLSKLKRMVLTTCMIRGIIPTTIGNMTSLVDLELSGNLLRGPIPVEIGLLKNLQQLELYYNYQLRGSIPEELGNLTELRDLDMSVNKFTGKIPESICRLPKLEVLQLYNNSLTGEIPSVIANSTTLRILSLYDNYLTGEIPMSLGLSSPLMALDVSENQLSGPLPAEVCYGGKLLYFLVLQNKFSGQLSKNYAKCETLLRFRVSYNHLEGPIPAGLLGLPHVAIIDLAYNNFTGPLDNSIGNSRNLSELFLQKNIITGVIPPEISLANNLVKIDLSNNLLSGPIPCGIGNLKKLNLLMLQANKLKSSIPDSLCSLKSLNVLDLSNNLLSGNIPERISELLPNSINFSRNSLSGPIPFSLLKGGLVESLSGNPGLCVPAYINTSVQNFPICPQTDKKRRLDSIWAIGLSVIIIIVGAALFVKRRLNRDRASVEHDETMSSSFFSYDVKSFHKRTFDQKEIIDAMVDKNIVGHGGSGTVYKIELKSGEFIAVKRLWSRGPKDHTSIEDQLVLDKELKTEVETLGSIRHKNIVKLYCFFSGFNSSLLVYEYMPNGNLWDAIHKGPVHLDWPTRHQIAIGVAQGLAYLHHDLLRPIIHRDIKSSNILLDVNYQPKVADFGIAKVLQARGGKDSTTTFIAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDTKEGAAEVLDKRLSGSFRDKIIQVLRIAIRCTYKAPSLRPTMKEVVELLTEADPFRCHSLNKSCHKEEAQ* | 950 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g01334 | 949 | Gene3D | Phosphorylase Kinase; domain 1 | 632 | 734 | - | - | |
Pte16g01334 | 949 | FunFam | receptor protein-tyrosine kinase CEPR1 | 632 | 734 | - | - | |
Pte16g01334 | 949 | SUPERFAMILY | Protein kinase-like (PK-like) | 637 | 928 | IPR011009 | - | |
Pte16g01334 | 949 | FunFam | Receptor protein-tyrosine kinase CEPR1 | 285 | 570 | - | - | |
Pte16g01334 | 949 | SMART | LRR_typ_2 | 501 | 525 | IPR003591 | - | |
Pte16g01334 | 949 | SMART | LRR_typ_2 | 285 | 309 | IPR003591 | - | |
Pte16g01334 | 949 | SMART | LRR_typ_2 | 212 | 236 | IPR003591 | - | |
Pte16g01334 | 949 | SMART | LRR_typ_2 | 162 | 188 | IPR003591 | - | |
Pte16g01334 | 949 | SMART | LRR_typ_2 | 477 | 500 | IPR003591 | - | |
Pte16g01334 | 949 | SMART | LRR_typ_2 | 91 | 115 | IPR003591 | - | |
Pte16g01334 | 949 | PRINTS | Leucine-rich repeat signature | 501 | 514 | - | - | |
Pte16g01334 | 949 | PRINTS | Leucine-rich repeat signature | 336 | 349 | - | - | |
Pte16g01334 | 949 | Gene3D | Ribonuclease Inhibitor | 25 | 303 | IPR032675 | - | |
Pte16g01334 | 949 | Gene3D | Transferase(Phosphotransferase) domain 1 | 735 | 943 | - | - | |
Pte16g01334 | 949 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 778 | 790 | IPR008271 | GO:0004672|GO:0006468 | |
Pte16g01334 | 949 | Pfam | Protein kinase domain | 651 | 926 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte16g01334 | 949 | SMART | serkin_6 | 649 | 935 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte16g01334 | 949 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 21 | 218 | - | - | |
Pte16g01334 | 949 | SUPERFAMILY | L domain-like | 248 | 566 | - | - | |
Pte16g01334 | 949 | FunFam | Leucine-rich repeat receptor-like protein kinase | 178 | 281 | - | - | |
Pte16g01334 | 949 | FunFam | leucine-rich repeat receptor-like protein kinase TDR | 735 | 939 | - | - | |
Pte16g01334 | 949 | Pfam | Leucine rich repeat | 92 | 150 | IPR001611 | GO:0005515 | |
Pte16g01334 | 949 | ProSiteProfiles | Protein kinase domain profile. | 649 | 935 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte16g01334 | 949 | SUPERFAMILY | RNI-like | 72 | 348 | - | - | |
Pte16g01334 | 949 | ProSitePatterns | Protein kinases ATP-binding region signature. | 655 | 677 | IPR017441 | GO:0005524 | |
Pte16g01334 | 949 | Pfam | Leucine rich repeat N-terminal domain | 26 | 64 | IPR013210 | - | |
Pte16g01334 | 949 | Gene3D | Ribonuclease Inhibitor | 304 | 570 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g01334 | Pte-Chr16 | 32835232 | 32838947 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g01334 | 24 | 933 | Receptor kinase-like Gene Family | AT5G49660 | 66.193 | 0.0 | 1243 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Pte16g01334 | Pkinase | 1.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g01334 | - | - | qsa:O6P43_015448 | 1416.36 |