Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01324 ATGGAGAACTATTCCTACTCCTCCTACCCTGAGTCTCGAGATTCCTCCCCTCGCTCTCGTGAAATTGACACAGAGAATCACTCCTGGGATGAACAGCCTTCTTCCAATGCAGCTGCTGCCACCACAACGATTTCTAATGCCACTGCTTCCGCCGGTAACGTTAACCCTGCGGCTGTTACTGCTACTGCTAACAACTACAAAGTCAAATTCATGTGCAGCTATGGCGGAAAGATTCAACCTAGGCCTCATGATAATCAACTTGCTTATGTCGGTGGTGATACGAAGATATTGGCTGTGGATCGTAATATTAAGTTCGCTGCTCTGATGGCTAAGCTTTCTTCTTTCTCTGATGCGGAGGTTTGTTTCAAATATCAACTGCTAGGTGAGGATCTTGATGCTTTGATCTCTGTTACGAATGATGAGGATCTTGAGCATATGATGGTTGAGTACGACCGCTTGTATCGTGCTTCTGCTAAGCCCGCTAGGTTGAGATTGTTTCTGTTTCCGTTGAATGGCTCTGCTCCCACTAGTTTTGGGTCCACGGAGATGAAATCGGAGCGACAATGGTTTGTAGACGCACTTAATTCTGTTCAAGTTCAGAATCTTGATGGTTCTTCGCCAGCGGCGCCTGTCGCGGCGGGGAATCCGGATTTTCTGTTTGGGTTTGATAAAGGGTACTCGGCCATTCCCGCAGCAAAGTCGACAAAATCTGAGCCTCCTCCAACGTTGCCTGGGTTGACCGTGAAGGATTTATCGGCGGGTTCAGATTGTGGATCGGAGGATCGGCATGGGGTTGGTGATCAGGTGGTGTCACCGGCCGAGATTCAGAGGCAGATCCATGAGTTGCAGAGGTTACAACTTGTCAACAATGAGCAACATTTACAGAGGAAAATCGATGAGGCCAACTCCAATGGGAGCACTGAAGCTTACTCAGTGGACTATTACTCTCCGAGAAACCCAGAGAAAACGGCACCTCCTCCAGCTTCTATGCAGGTTCCGCTGCAGGTACAAATGCAGGCAGCGACATATTTGCCTGAGAGGCATATGACTGCTGGCGGATTTCCCGTGGCTGCAGTTTCCGGAACTGATCAACCTGTTTACCTCATTTCAACTCCAGCCGGAATGTATCAAGCTACGGGGTTGCGTCCTATGGCAGGACCAGTTGGTCAGTCTTACTATGGATTGCCAAGAATGGTCCCAACAGAAATGTTCAATGCAGTATCACAAACTCCCCTTCCTCCTGCACAAACTAAGCATGGAGCTTACACAGAGAACACTGTAATGGCTCAACAGAAGGTTGGGGTGGCGGAGGGTGGTTATCTAGTAGGGTATGACACTGCTGGTAGGCCTGTGTACTATACGACTGGGCCACCTGGAGCGGTAATGCAACAGTACCAGGTGGTGCCAGGTGGAGTCGATGCAAGACAAGGAGTCAATGCAGGCTGTGTTGCTTCGAATCAAGAGGTTAAGGTCGCTGTTAACAAGGTTTCTCCAGCTCCTGCAGTGTGA 1509 0.4937 MENYSYSSYPESRDSSPRSREIDTENHSWDEQPSSNAAAATTTISNATASAGNVNPAAVTATANNYKVKFMCSYGGKIQPRPHDNQLAYVGGDTKILAVDRNIKFAALMAKLSSFSDAEVCFKYQLLGEDLDALISVTNDEDLEHMMVEYDRLYRASAKPARLRLFLFPLNGSAPTSFGSTEMKSERQWFVDALNSVQVQNLDGSSPAAPVAAGNPDFLFGFDKGYSAIPAAKSTKSEPPPTLPGLTVKDLSAGSDCGSEDRHGVGDQVVSPAEIQRQIHELQRLQLVNNEQHLQRKIDEANSNGSTEAYSVDYYSPRNPEKTAPPPASMQVPLQVQMQAATYLPERHMTAGGFPVAAVSGTDQPVYLISTPAGMYQATGLRPMAGPVGQSYYGLPRMVPTEMFNAVSQTPLPPAQTKHGAYTENTVMAQQKVGVAEGGYLVGYDTAGRPVYYTTGPPGAVMQQYQVVPGGVDARQGVNAGCVASNQEVKVAVNKVSPAPAV* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01324 502 Coils Coil 284 304 - -
Pte16g01324 502 CDD PB1_UP2 71 168 - -
Pte16g01324 502 PANTHER OS05G0427100 PROTEIN-RELATED 9 379 - -
Pte16g01324 502 SMART PB1_new 82 170 IPR000270 GO:0005515
Pte16g01324 502 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 87 170 - -
Pte16g01324 502 Pfam PB1 domain 83 169 IPR000270 GO:0005515
Pte16g01324 502 Gene3D - 88 169 - -
Pte16g01324 502 MobiDBLite consensus disorder prediction 14 28 - -
Pte16g01324 502 MobiDBLite consensus disorder prediction 1 39 - -
Pte16g01324 502 SUPERFAMILY CAD & PB1 domains 83 177 - -
Pte16g01324 502 MobiDBLite consensus disorder prediction 232 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01324 Pte-Chr16 32736700 32739041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01324 66 197 MAP Kinase Kinase Kinase AT5G57610 45.324 1.87e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01324 - - qsa:O6P43_019535 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01324 16 32736700 32739041 Pte16g01324 16 32736700 32739041 RCT