Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01313 ATGCCTCACAGGACGACTTACTTTTTTCCAAGGCAATTTCCGGACCGGGGATTTGACGAATCTTCGAAGCAGCTGTTGGATCACGAGAAGCAGAAAGCTACCAACGCTATCAAATCTGGTGATACTGAAAGCGATGTGAAAAAGTCGTCTCATTTTTCTTCAACGTCTTCAACCACTCCAGCAAAAGACGATGTCGTTTTCTCCACGGGTGCTACGAACTTGTCAGCCGTGTCTGATCTGCTTATTAGTCGAAGTGGTGACAAGTTCCACGTTAAACACAAACACCTTCCCTTCTTTCATGACTGGTTGACAGATAACAAAAAAAGTGGCAGATCGGGGCACGTGAAACCGTATCTTAATCGATTATCGTGCGAGGACCGAGAGCTGCTTCTCCCAGAAGACCGTGTACCTGAACCGTCACCGGAGCCACAGCAGGAGGTGTTGCCTGAGCCTCCAGCTACCGGAGAAGAAGTCAAAGATCATGCCCTTGACCGGAGTTTCGATCGTCAGGTGTCGCTGCAAAGGTTTTCTAGTGGAAGTAGCTATGCAGGGAGTTTGTTTTCTGGTACGACTTTCGACGGGAATTTCTCGAGCGACATCAAAGAGGAAACATCGTCTTCTGTCGTCTCTGCTTTACCTCCAACGAGGAGACATAAGGAAGAAGGGGAAGAAAGTGGAGAGACTTTAGTTCAGAAAACAAGAGAGAGCTATTACTTGCAGATATCTTTGGCTAGGAGGCTTACTTCTCAAGCAACCATTGTTTCCGAGCCTATACTTAGCGAAGTCCATGGTATCGAGAATTTGGATGCAGAATCTGTCTCTTACCGTCTCTGGGTCAGTGGTTGCTTGTCATACACGGACAAAATATCGGATGGTTTTTACAATATTCTGGGGATGAATCCATATGTATGGCTGATGTGCAATGAAACAGAGGAAGGAAGGAAAATGCCGACTCTGATGACACTAAAAGCAGTTGCACCCAGTGATACCGCGATGGAGGTGGTTCTCGTTGATGGCCAAGAGGACTATCGGCTAAAGGAACTCGAGGATAAAGCCCAGGAATTGTACTGTGTTTCGGAGAACACAATGGTTTTGGCAGAGAAACTGGGCCAACTTGTAGCCGTCTACATGGGGGGCATTTTCCCTTTGGAGCAAGGGGATCTGCATACCCAATGGAAGCATGTCAGCAAGAAATTAAAGGATTTGCACAAATGCATTGTAGTACCTATTGGTAGCTTATCCACAGGAATCTGTAGGCATCGGGCGATCCTTTTCAAGAAACTGGCAGATTTCATAGGATTACCTTGTCGAATAGCACGAGGTTGCAAGTATTGTGTTGAAGATCACCGGTCATCTTGCCTTGTAAAAATTGAAGATGACGGGCATCTCCCAAGGGAGTACGTGGTTGATCTAGTTGGGGAACCAGGGAATGTTCACGGTCCAGACTCCACAATAAATGGAGATTGTAATTCTTCTGTGCCTTCACCATTCCGATTTTCTCATCTAAAAGCGTTCCGACGACCTTATATGGATGATGGATCAAGTCATCAAGTGGTAAGCTCAAGGGATCAATCTCATTTCCAGGAACGTGGACTCCCTGCAGTTGGGCATGCTTTTTCAGAAATGGGATCATCGGTAACAAGATTTGAGCTCAAAGGAAATGGAACTTCATTACGCAGACATTCTAAGGTCGATGGGGATAAATTAGTTGCTAAAAAGACTTCTCGAAATAATATGCCGAAGAATGCAGTTATTAGCACTTCTGCACATAAAAGAGTCAGCTCATGTGGGCTGTCTGAAGTAAAGGAGATGGATGAAAACCAAGATGATCATACTGTGAAAACTATTCCCAAATACTTAAATCTCGAGCCATCTCTTGCAATGGACTGGCTTGAGATATCATGGGATGAACTCCAAATCAAGGAGCGTGTTGGTGCTGGTTCATTTGGGACAGTCCACCGTGCCGAATGGCATGGATCGGACGTAGCAGTCAAGGTTTTGACAATCCAGGACTTTCACGACGATCAGTTGAAGGAGTTCTTAAGGGAGGTTGCAATAATGAAACGTGTTCGCCACCCAAACGTGGTTCTCTTCATGGGCGCTGTTACCAAGCGTCCGCATCTCTCTATAGTGACAGAGTATCTGCCTAGAGGTAGTCTGTATCGACTCATACATAGGCCAGCTTCTGGTGAAATCTTAGATCAGAGAAGGCGATTGCGCATGGCTTTGGATGTGGCTAAAGGGGTGAATTATCTCCACCGTTTGAACCCGCCAATAGTGCACTGGGATCTCAAAACACCAAATTTGCTCGTGGATAAAAATTGGACAGTAAAAGTGTGTGATTTTGGCTTGTCCAGATTCAAGGCAAACACTTTCATTTCTGCAAAATCAATTGCTGGAACACCCGAATGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGACGTGTATAGTTTTGGCGTCATTCTGTGGGAACTTGTTACCATGAAGCAGCCGTGGACTGGACTTAGCCCTGCTCAGGTGGTCGGTGCTGTTGCTTTCCAGAATAGAAGGCTTGCGATCCCTCCAAATACTGCTCCTGTCCTAGTTTCCCTTATGGAATCTTGTTGGGCTGATGATCCTGCTGATCGCCCATCATTCACAAGTATAGTGGATACATTAAAGAAGCTGTTGAAGTCTCCAACTCAGATGACACTGACAAAGATGGGCGGCTTACCTCCACCAGAGTGA 2745 0.4587 MPHRTTYFFPRQFPDRGFDESSKQLLDHEKQKATNAIKSGDTESDVKKSSHFSSTSSTTPAKDDVVFSTGATNLSAVSDLLISRSGDKFHVKHKHLPFFHDWLTDNKKSGRSGHVKPYLNRLSCEDRELLLPEDRVPEPSPEPQQEVLPEPPATGEEVKDHALDRSFDRQVSLQRFSSGSSYAGSLFSGTTFDGNFSSDIKEETSSSVVSALPPTRRHKEEGEESGETLVQKTRESYYLQISLARRLTSQATIVSEPILSEVHGIENLDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYVWLMCNETEEGRKMPTLMTLKAVAPSDTAMEVVLVDGQEDYRLKELEDKAQELYCVSENTMVLAEKLGQLVAVYMGGIFPLEQGDLHTQWKHVSKKLKDLHKCIVVPIGSLSTGICRHRAILFKKLADFIGLPCRIARGCKYCVEDHRSSCLVKIEDDGHLPREYVVDLVGEPGNVHGPDSTINGDCNSSVPSPFRFSHLKAFRRPYMDDGSSHQVVSSRDQSHFQERGLPAVGHAFSEMGSSVTRFELKGNGTSLRRHSKVDGDKLVAKKTSRNNMPKNAVISTSAHKRVSSCGLSEVKEMDENQDDHTVKTIPKYLNLEPSLAMDWLEISWDELQIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDQRRRLRMALDVAKGVNYLHRLNPPIVHWDLKTPNLLVDKNWTVKVCDFGLSRFKANTFISAKSIAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMKQPWTGLSPAQVVGAVAFQNRRLAIPPNTAPVLVSLMESCWADDPADRPSFTSIVDTLKKLLKSPTQMTLTKMGGLPPPE* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01313 914 FunFam Serine/threonine-protein kinase CTR1 717 902 - -
Pte16g01313 914 Pfam Ethylene-responsive protein kinase Le-CTR1 270 478 - -
Pte16g01313 914 Pfam Protein tyrosine and serine/threonine kinase 638 892 IPR001245 GO:0004672|GO:0006468
Pte16g01313 914 MobiDBLite consensus disorder prediction 133 157 - -
Pte16g01313 914 CDD STKc_MAP3K-like 644 892 - -
Pte16g01313 914 MobiDBLite consensus disorder prediction 28 64 - -
Pte16g01313 914 MobiDBLite consensus disorder prediction 49 64 - -
Pte16g01313 914 SMART serkin_6 638 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01313 914 ProSiteProfiles Protein kinase domain profile. 638 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01313 914 FunFam Serine/threonine-protein kinase isoform 1 628 716 - -
Pte16g01313 914 SUPERFAMILY Protein kinase-like (PK-like) 617 891 IPR011009 -
Pte16g01313 914 Gene3D Transferase(Phosphotransferase) domain 1 717 905 - -
Pte16g01313 914 ProSitePatterns Protein kinases ATP-binding region signature. 644 665 IPR017441 GO:0005524
Pte16g01313 914 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 216 899 - -
Pte16g01313 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672|GO:0006468
Pte16g01313 914 MobiDBLite consensus disorder prediction 204 229 - -
Pte16g01313 914 MobiDBLite consensus disorder prediction 28 48 - -
Pte16g01313 914 MobiDBLite consensus disorder prediction 214 229 - -
Pte16g01313 914 PRINTS Tyrosine kinase catalytic domain signature 753 771 IPR001245 GO:0004672|GO:0006468
Pte16g01313 914 PRINTS Tyrosine kinase catalytic domain signature 819 841 IPR001245 GO:0004672|GO:0006468
Pte16g01313 914 PRINTS Tyrosine kinase catalytic domain signature 863 885 IPR001245 GO:0004672|GO:0006468
Pte16g01313 914 PRINTS Tyrosine kinase catalytic domain signature 712 725 IPR001245 GO:0004672|GO:0006468
Pte16g01313 914 Gene3D Phosphorylase Kinase; domain 1 631 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01313 Pte-Chr16 32652189 32659789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01313 1 909 MAP Kinase Kinase Kinase AT4G24480 57.232 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pte16g01313 PK_Tyr_Ser-Thr 4.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01313 - - qsa:O6P43_015405 1186.79