Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01307 ATGGTTGAGAAAAGGAAGGAACGCCAGAAGGTCTCTTTTAGCGAGGAGGACGCTTTTTCTCTCCTACAAAGGTACGAACCGACTACAGTTCTTGCATTGCTTCAAGAGGTTGAACATCATGCTGATCTGAAGATTGATTGGAATGAATTGGTGAAGAAGACTTCAACTGGGATTACTAATGCGAGAGAGTATCAGATGCTATGGCGGCATTTGGCTTACCAAGATGACTTGCTGGACAAATTTGAAAATGGAGCTCAGCCTCTGGATGATGACAGTGACATAGAATGTGAACTGGAAGCATTTCCTGCTCCTACTAACGAAGCATTGACTGAGGCTGAAGCATGTGTAAAGGTTATGATTGATTCTGGGATACAGAGTGAATCTAATATTCTCAATGGCTCAACGATTGAGGCGCCATTGACTATAAATATTCCCTGTGGCCAAATAGGTTCTTCAGAAATTTTGCAGCCATCATGTTCCACCGGGGGGAAAAACATTATTGTTCCAGTTACTGTTCAGAAATTTCCCCTCCCTCCAGTGCCACCAATGGAAAATTTGGAAGCTAATGGATTAACTGGTGGGAATAATATTTCATTAAGAAGGAAGCGGAAATGGTCAGAGGAAGAAGACAGACAGCTTATGGCTGCTGTGAAAAAGTGGGGTGAGGGTAACTGGGCAGTTATCATTAACAAAGGAGAATATGACTGGGGTGGTAGACAATCTTCTCATCTGTCTCAGAGGTGGGCAACATTACGGAAGAAAAACACCAACTTAAGCATTGGAAAAAACTCAACTGGACCTAAACTTACCGAAGCACAGATGGCAGCTCGTCATGCAGTGTCAATGGCTCTTGACATGCCAGTCAAAAGCCTGAAAGCCCATGGAATGCCTGGTCACGTTTCAACTAAGCTTGTCCTGTCCAATACTACTTTTGAAACTTCTGCTGTTGGCGACGCCCCAGGGCATCTGTCTAAACAGGCTTCTACTATGGCGAACCTTTCTCCTGCTGTAAAATCTCAACCAACCTCTAAAAAGACAATGAAGTTTAATCTTTGTCCAGTTTCTGCTGTCCGAGCTACTGCAGTTGCTTCTGGGGCTGGTATCAGCTCACCATTAGATGCTTCATCATTGACCCAGGTTGCTGAGGCAACAAATGCTGTTCATATTTTACGTACCAGTGGATCTTCGGCCAGGTCTGCTATGCCTGCCAGTGGAGCTGCTCAATCAGATACTCATCCAAATCAACATTGCACCTATACTAGTCAGATAACTACACCTGTTTCTTCCCATTCTAATACAACCTGTACACCTGCTGCACCTCTCAGCAGCCCTTCAAAAGCTTCCTCACTAGCAGGTGAAACCACCTCAACTCCATTTGAAGTGCCAAAATCAGAACCGAAGAATGAGGGTATCCCTGTGGCTAATGAGTTTCCTTTGAAGCAAGAAGTCAATACTCTACAAGGAAGAGAAATTCATGATCCGAGCTGTGCATCAAAAGAGCAAAGGCAAGGAGATGAATTTAGTAGAAGACCACATGCAGAAATAGAGATTATTGAAGAAAATAAAGCAGCTCCCGCTAGCTCAGGGGCAGAATGTAGAAGTCAAGAAGTGGTTATGAATGTGGCATCTGCTGACAACAACGTACTTGCTGCTAAGGTGGTAGCTATAAATGAAAGCAAGATGTTTTCTGTTGTTAGTAATAGTGACCAAAATATGAATCCGAGCACCATTCTGGATAAATGTAACGCTAAACAAGAGCTGCCAGTGAATGTGGATATTGCAGAGGGGCTATGA 1794 0.437 MVEKRKERQKVSFSEEDAFSLLQRYEPTTVLALLQEVEHHADLKIDWNELVKKTSTGITNAREYQMLWRHLAYQDDLLDKFENGAQPLDDDSDIECELEAFPAPTNEALTEAEACVKVMIDSGIQSESNILNGSTIEAPLTINIPCGQIGSSEILQPSCSTGGKNIIVPVTVQKFPLPPVPPMENLEANGLTGGNNISLRRKRKWSEEEDRQLMAAVKKWGEGNWAVIINKGEYDWGGRQSSHLSQRWATLRKKNTNLSIGKNSTGPKLTEAQMAARHAVSMALDMPVKSLKAHGMPGHVSTKLVLSNTTFETSAVGDAPGHLSKQASTMANLSPAVKSQPTSKKTMKFNLCPVSAVRATAVASGAGISSPLDASSLTQVAEATNAVHILRTSGSSARSAMPASGAAQSDTHPNQHCTYTSQITTPVSSHSNTTCTPAAPLSSPSKASSLAGETTSTPFEVPKSEPKNEGIPVANEFPLKQEVNTLQGREIHDPSCASKEQRQGDEFSRRPHAEIEIIEENKAAPASSGAECRSQEVVMNVASADNNVLAAKVVAINESKMFSVVSNSDQNMNPSTILDKCNAKQELPVNVDIAEGL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01307 597 MobiDBLite consensus disorder prediction 492 511 - -
Pte16g01307 597 SUPERFAMILY Homeodomain-like 201 254 IPR009057 -
Pte16g01307 597 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 571 - -
Pte16g01307 597 MobiDBLite consensus disorder prediction 493 511 - -
Pte16g01307 597 SMART sant 201 254 IPR001005 -
Pte16g01307 597 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 256 IPR017930 -
Pte16g01307 597 Pfam Myb-like DNA-binding domain 202 251 IPR001005 -
Pte16g01307 597 Gene3D - 197 259 - -
Pte16g01307 597 MobiDBLite consensus disorder prediction 394 472 - -
Pte16g01307 597 CDD SANT_TRF 203 253 - -
Pte16g01307 597 ProSiteProfiles Myb-like domain profile. 201 252 IPR001005 -
Pte16g01307 597 MobiDBLite consensus disorder prediction 394 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01307 Pte-Chr16 32612575 32616890 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte16g01307 Myb_DNA-binding 3.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01307 - - qsa:O6P43_015394 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01307 16 32612575 32616890 Pte16g01307 16 32612575 32616890 RCT