Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01294 ATGATGTGGGATGATTGTGATCACAGTGATCCCGGAGCCGATCAATCCCTACCCGACCAAGATTCTTACCTTAATTTCGACTTTCTCTCTTCCATTTCTAAACCCAAGGACTACTATAAGATATTAGAAGTGGATTTTGATGCTACGGATGACACCATTCGGTCCAATTATATTCGTCTTGCGCTGAAATGGCATCCCGACAAGCAAAAAGATCAGGACTCTACAACCTCAAGGTTTCAAGAGATAAACGAGGCATACCAGGTATTAAGTGATCCCGTCAAGAGGAGAGAATATGACGAACAAGGGACGTTCTATGTCTTTGATTCAAGTTTAATTGAGTACCTTAATCGTTACAAGGGCCTCATTTTGACCTGTAACGGGCTTGGGATGAAACATCCGATGTGA 405 0.4247 MMWDDCDHSDPGADQSLPDQDSYLNFDFLSSISKPKDYYKILEVDFDATDDTIRSNYIRLALKWHPDKQKDQDSTTSRFQEINEAYQVLSDPVKRREYDEQGTFYVFDSSLIEYLNRYKGLILTCNGLGMKHPM* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01294 134 FunFam Chaperone protein DNAj, putative 29 116 - -
Pte16g01294 134 Pfam DnaJ domain 37 99 IPR001623 -
Pte16g01294 134 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 133 - -
Pte16g01294 134 PRINTS DnaJ domain signature 57 72 IPR001623 -
Pte16g01294 134 PRINTS DnaJ domain signature 74 94 IPR001623 -
Pte16g01294 134 PRINTS DnaJ domain signature 39 57 IPR001623 -
Pte16g01294 134 PRINTS DnaJ domain signature 94 113 IPR001623 -
Pte16g01294 134 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Pte16g01294 134 CDD DnaJ 37 91 IPR001623 -
Pte16g01294 134 Gene3D DnaJ domain 29 112 IPR036869 -
Pte16g01294 134 SUPERFAMILY Chaperone J-domain 32 117 IPR036869 -
Pte16g01294 134 SMART dnaj_3 36 94 IPR001623 -
Pte16g01294 134 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01294 Pte-Chr16 32509491 32511598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01294 30 107 C2H2 Transcription Factor Family AT1G74250 39.759 1.98e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01294 - - jre:108985063 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01294 16 32509491 32511598 Pte16g01294 16 32509491 32511598 RCT