Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01292 ATGGCACCCGGTTATGACTGTGCAGGTTCGAGCCTCCTCTGTGCAGAAGACAATAGCATTTTTGATGATAACGAATTTGGGTTGGTGGAGGACTCGCAAACTCCATGGTATCATAAATATGATGGAATTCATGAACAAGCCCATAGCTTTGATAGTGGAGATGGGTTGCAAATACAGAGTGAAGATTGTTTGATGCTTCTCCTGGAGAAAGAATGCCAGCATTTGCCTCAAGCTGATTACTTGAATAAGCTCAGGAGTGGGGATTTGGACATTGGGGCTAGAAAAGAGGCTGTCACTTGGATTGAAAAGGTACGGTCCCATTTTGGCTTTGGACCTCTTTGTGCATATTTATCTATAAACTACTGGGATCGGTTCCTCTCAACATATGAACTACCTAAGGGGAAGGCTTGGACAATGCAGTTAGTAGCTGTGGCATGTTTATCACTTGCAGCAAAAGTGGAGGAGACAGAATTGCCTCTGCCTCTTGATTTGCAGGTGGAGATCACTAATGATACTCATCCACTTAAAAGCTCAATCTCACAAGCAATTCAAGTGATAGTGAGCACAATGAAAGGTTCCCCACACTCGCTCCCTCCGTATTTAACTTTCACCCACGATTTTGTATTATGTGATACAAGCACTCGCTACAGTAATAGCAATAATGACAGAGGTATTGACTTCTTGGAATTTAGGCCTTCAGAAATCGCAGCAGCAGTGGCTATATATGTAGCTGGGCAAATCCAAAAGGTTGACACTGAGCAATCAACACTTGTTCTTATTCAACTTGTTGAAAAGGAAAGTGTTCTGGAGTGTGTTAAAAGGATTCATAATTTGTCATCAAACATAAAGAATCAATCAAGTACTTCAGTCTCATCTGTGCCTCAAAGTCCAATAGGAGTACTTGATGCTGCGTGCTTCAGCTATAAAACCGATGAGTCCGTGCCTGACTTATGTGCAAATTCTTCACACAGTAGTCCAGATGCTAAAAGAAGGAAGCTAAACAAAACCTGTGGATTGGAGTCATTTTAG 1029 0.4198 MAPGYDCAGSSLLCAEDNSIFDDNEFGLVEDSQTPWYHKYDGIHEQAHSFDSGDGLQIQSEDCLMLLLEKECQHLPQADYLNKLRSGDLDIGARKEAVTWIEKVRSHFGFGPLCAYLSINYWDRFLSTYELPKGKAWTMQLVAVACLSLAAKVEETELPLPLDLQVEITNDTHPLKSSISQAIQVIVSTMKGSPHSLPPYLTFTHDFVLCDTSTRYSNSNNDRGIDFLEFRPSEIAAAVAIYVAGQIQKVDTEQSTLVLIQLVEKESVLECVKRIHNLSSNIKNQSSTSVSSVPQSPIGVLDAACFSYKTDESVPDLCANSSHSSPDAKRRKLNKTCGLESF* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01292 342 Gene3D - 224 294 - -
Pte16g01292 342 SMART cyclin_7 99 244 IPR013763 -
Pte16g01292 342 PANTHER CYCLINS 60 281 IPR039361 -
Pte16g01292 342 Pfam Cyclin, C-terminal domain 225 291 IPR004367 -
Pte16g01292 342 Gene3D - 78 191 - -
Pte16g01292 342 MobiDBLite consensus disorder prediction 318 342 - -
Pte16g01292 342 CDD CYCLIN_AtCycD-like_rpt1 93 167 - -
Pte16g01292 342 SUPERFAMILY Cyclin-like 59 172 IPR036915 -
Pte16g01292 342 MobiDBLite consensus disorder prediction 325 342 - -
Pte16g01292 342 Pfam Cyclin, N-terminal domain 64 190 IPR006671 -
Pte16g01292 342 SUPERFAMILY Cyclin-like 225 289 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01292 Pte-Chr16 32495292 32498113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01292 61 318 Core Cell Cycle Gene Families AT2G22490 38.849 6.87e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01292 K18810 - qsa:O6P43_015367 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01292 16 32495292 32498113 Pte16g01292 16 32495292 32498113 RCT