Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01286 ATGCGTTACTTCTCTTGCAATGGCGAGTCTGCAATCGCCGCCTGCGACCCTTACAACTGGGACATCAATCTCAAGAAGAAGATTAAAAGTCCAGATATCGACAGAACCATTAAGCATTCGAAGCCCATCAGACAATTCCAGTACTCAGAACTCGTTGCTGCCACCAATGGTTTTTCAGCTGGCAACTTCTTAGGTAAAGGCAGCCATGGCAGCGTCTACAGAGCTGCTCTAGAAAACGGCAACCTTATTGCCGCTGTCAAAAGAACCAAGTTCACCAAACCATGTTCGCGTAACAGTACCAGCTGTAACTCTACGACTCCTGCAGACAACGAGATCGAAATTCTATCTAGAGTACGACATCCTCGACGGTTCGTTAATCTTGTTGGGTTTTCTGCAGACACAAACAACAGCAAGTTGATTGTCGTTGAGTATATGCCCAACGGTTCTCTCTACGATCTATTGCATTCTGTTCCAAGACCGCCCGGTTGGACCCGCCGTGTTCGGTGCGCTTTACAGGTTGCGAAAGCGGTTCGAGCCTTGCACTCCTCTAACCCACCGGTCATTCATCGTGATATCAAGTCTTCCAACGTATTGTTAGATGGAAACTGGGACGCCAGGCTCGGAGACTTCGGCTTGGCCATAAGAGGACACGTGGAGGACGTACATGTGAAGTGCACACCGCCGGCGGGGACATTAGGGTACCTCGATCCGGGATATCTTGCACCGGGGGATCTGAGCACCAAGAGTGACGTCTTCAGTTTCGGGATCTTGTTGCTGGAGATCATCAGCGGCCGGAATGCCATTGACGTAAAATACAGTCCACCTTCCGTGGTGGACTGGGCCGTGCCGTTGATCAAGCGTGGGGAATTTACTGAAATCTGCGACCCACGTGTCGGGTTTCCGTCTGACCCGTATGTGATCCAGAAACTGACGGTTCTTGCGGCGAGGTGCGTGAGGCCGAAAGCGCAGAAGCGGCCGTCCATGGAGGAGGTTGTGGAGTGTCTTAAATCGGTAAAGAAGATGATGCACGCGCCGCCTATTTGGAACAGCCTGAGGCGGCGAGTGAGGCGCGTAGAGAAGGATACAGCACCGTTGATGCAGTGCGAAACGTATGAGAGGAGTGAGGAGGTTATGAAAGCAGTGAAAGTAGTTGGGAGTAGACGGAACAAGAAAGTATCTAGTGTGTCAGGTCTAGTGTATGACAGTGAGCCCGTTCATTTCGTGGTGAGATCGAAATCGATTGGATCTGGTATGGAAATGAGCGTGGCGTCAGATCTAAAGTCAAGTGGGAATAAGAACCAATGCGGTGTCGTTTTCAAAAAGCAAAGTCTAGGTGTTGTAGCAGTGAGAATGCCAAAGGTGAAATTGAGCAAGTCAAGGTCGATGGGGGTATTGCAGAGTCCAAGGCTGCATCATCATCGCCATGAGGTCGATGACAATAACCACAACATGAACCCTAATAAGAATTCAAAGACTGTGTTTAAGTTGGGAGACAGTTCTGCTAATCCAATTCAATCACAGGATGATGAGGTTGATGTGTTATTGTCCAAGCTGGTGGTTTTAGATCACAAGAAATTAGAGCAAAAAGATTCTTGA 1596 0.4912 MRYFSCNGESAIAACDPYNWDINLKKKIKSPDIDRTIKHSKPIRQFQYSELVAATNGFSAGNFLGKGSHGSVYRAALENGNLIAAVKRTKFTKPCSRNSTSCNSTTPADNEIEILSRVRHPRRFVNLVGFSADTNNSKLIVVEYMPNGSLYDLLHSVPRPPGWTRRVRCALQVAKAVRALHSSNPPVIHRDIKSSNVLLDGNWDARLGDFGLAIRGHVEDVHVKCTPPAGTLGYLDPGYLAPGDLSTKSDVFSFGILLLEIISGRNAIDVKYSPPSVVDWAVPLIKRGEFTEICDPRVGFPSDPYVIQKLTVLAARCVRPKAQKRPSMEEVVECLKSVKKMMHAPPIWNSLRRRVRRVEKDTAPLMQCETYERSEEVMKAVKVVGSRRNKKVSSVSGLVYDSEPVHFVVRSKSIGSGMEMSVASDLKSSGNKNQCGVVFKKQSLGVVAVRMPKVKLSKSRSMGVLQSPRLHHHRHEVDDNNHNMNPNKNSKTVFKLGDSSANPIQSQDDEVDVLLSKLVVLDHKKLEQKDS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01286 531 Gene3D Phosphorylase Kinase; domain 1 20 144 - -
Pte16g01286 531 Pfam Protein kinase domain 61 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01286 531 PANTHER OS01G0253100 PROTEIN 39 339 - -
Pte16g01286 531 SUPERFAMILY Protein kinase-like (PK-like) 41 351 IPR011009 -
Pte16g01286 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pte16g01286 531 Gene3D Transferase(Phosphotransferase) domain 1 145 347 - -
Pte16g01286 531 FunFam Serine/threonine-protein kinase-like protein 145 348 - -
Pte16g01286 531 SMART serkin_6 58 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01286 531 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Pte16g01286 531 ProSiteProfiles Protein kinase domain profile. 58 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01286 Pte-Chr16 32445672 32448070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01286 31 345 Receptor kinase-like Gene Family AT3G59420 40.187 7.20e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte16g01286 Pkinase 2.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01286 - - jre:108982029 578.941