Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01278 ATGAGGAAGAAAAGGAAAGGAAGTGCAGCTGATGAATGCGCAAATGTACGAGAGGTTTTGACATCCTCGCATGACTCCTTGTCATCCAACGTTAGATCTCACTATTCACTTGAGGATTATGCTAGATTGAAGAAGAGGTGTAAAGAACATGCTGACGTCGAGGCTGTTCTTTCCCACAAGAGTAGAATTGCGGGAATCGCAACAGCACCACCATGTGGAACTTCATCTCTGCTCACTCCTGGAAGAGGTATCAAGAGGAAGATTGGCTGTATAGATGTTGCTACTCAAATGGGGAGAAAGAAAAAAATTGAAGATGATTATACAGCTGGTGACACAATCGGGCAAGGTAAATTTGGGTCTGTCTGGCTGTGTAGGTCGAAGGTTAGTGGAGCAGAGTATGCTTGTAAGACACTTCGGAAAGGAGAGGAGACAGTTCATAGAGAAGTGGAGATAATGCAGCATTTATCTGGTCACCCAGGGGTGGTAACACTGCAGGCAGTTTATGAAGAATTAGATTGCTTTCATCTTGTCATGGAATTGTGCTCTGCGGGGCGTTTGATTGATCAGATGGTTAAAGAGGGTCCATATTCAGAACAACGTGCTGCCAATACATTCAAGGAAGTTATGTTAGTTATCAAGTATTGTCACGATATGGGTGTTGTGCACAGAGATATCAAACCTGAGAACATTCTCCTTTCAGCCTCAGGAAAGATAAAACTTGCTGACTTTGGTCTGGCCATGAGAATTTCTGATGGTCAGCATTTGACTGGTTTAGCGGGAAGCCCAGCATATGTTGCCCCAGAAGTATTGTCGGGTAAATATTCAGAGAAAGTGGATATATGGAGTGCTGGTGTCCTTTTACACGCACTCTTGGTCGGTTCTCTTCCATTCCAAGGAGATTCCTTGGAAGCAGTTTTTGAGGCTATCAAGAATGTGAAACTTGATTTCCATTCTGGGATATGGGACTCGATATCTAAACCTGCCCGAGACCTTGTAGCAAGGATGCTAGCAAGGGATGTTTCTGCTAGGATAACTGCTGAGGAAGTGCTTAGGCATCCATGGATATTATTCTACACAGAGGATACATTATCGAAGCGGCCAATCAAATCCAGATCAAAGTATCAAGGAGTAACTTGCCGCCATCTTCGTGTGTCACTTGAACCAAGGTTTGAAGGGAAAATAGATAGTGGTTCTCCTGGTGAGCACTCGAGTCCGCTATCTTCATTTGGAAGTGGAAAGTCAGAGGAACAGGATGAATGTGTTCTGATAGATGTACTTGCCACTGCAATTTCACATGTGCGGATATCTGAGCCAAAGAGGAGCAGGTTGTGTGTGCCTGCAGGTCCCATAGAGCAGCAGGGTTCTTCTAACTTGAAGGCCAGCAACCTTTGTAAAGCATTTTAA 1404 0.443 MRKKRKGSAADECANVREVLTSSHDSLSSNVRSHYSLEDYARLKKRCKEHADVEAVLSHKSRIAGIATAPPCGTSSLLTPGRGIKRKIGCIDVATQMGRKKKIEDDYTAGDTIGQGKFGSVWLCRSKVSGAEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEELDCFHLVMELCSAGRLIDQMVKEGPYSEQRAANTFKEVMLVIKYCHDMGVVHRDIKPENILLSASGKIKLADFGLAMRISDGQHLTGLAGSPAYVAPEVLSGKYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKNVKLDFHSGIWDSISKPARDLVARMLARDVSARITAEEVLRHPWILFYTEDTLSKRPIKSRSKYQGVTCRHLRVSLEPRFEGKIDSGSPGEHSSPLSSFGSGKSEEQDECVLIDVLATAISHVRISEPKRSRLCVPAGPIEQQGSSNLKASNLCKAF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01278 467 FunFam Serine/threonine-protein kinase PEPKR2 98 422 - -
Pte16g01278 467 MobiDBLite consensus disorder prediction 391 413 - -
Pte16g01278 467 CDD STKc_CAMK 106 354 - -
Pte16g01278 467 SUPERFAMILY Protein kinase-like (PK-like) 104 382 IPR011009 -
Pte16g01278 467 ProSiteProfiles Protein kinase domain profile. 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01278 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Pte16g01278 467 Gene3D Transferase(Phosphotransferase) domain 1 98 388 - -
Pte16g01278 467 SMART serkin_6 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01278 467 Pfam Protein kinase domain 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01278 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 93 363 - -
Pte16g01278 467 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01278 Pte-Chr16 32395169 32398259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01278 107 355 EF-hand Containing Proteins AT1G50700 44.788 2.60e-76 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte16g01278 Pkinase 3.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01278 - - qsa:O6P43_015356 754.592