Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01275 ATGGCTTCAGAATCAGTTACGCTACTAGGCTCCTGGGCAAGTCCATTTGCTCTTAGGGTTATTTGGGCTTTGAAGCTGAAAGGGATTCAGCATGAATACATAGAGGAGGATCTAGTTAACAAGAGTCCAAGGCTTCTGCAGTACAATCCTGTCTACAAGAAAATACCAGTTCTTGTCCATAACGGCAGGTCAGTGGTGGAATCACTGGTGATCATTGAATACATCGACGAGACATGGAAGCAAACTCCTCTTCTTCCACAAGATCCCTATGAAAGGACCAAGGCACGGTTTTGGGCAAAATTTGCTGATGACAAGTGCGTGCCAGCAATCCTGGGGACCTTGCTGAAGAAAGGAGAGGAACAAGAGAAAGCTGCTCAGGAAGCTCAGGAGATTTTGAAGACTCTGCAAGACGGTCTCGAAGGAAAGCCATTCTTTGGAGGTGAAACAATCGGCTTTGCAGACATTGCCATTGGATGGCTTGGAGTCTGGGTTCGCATTTGTGAGGAAATTACAGGGAAAGTTATGATCAACACAGAGACCATGCCCTTGCTTGATGCTTGGTTTCATAGATTTCTTGGATTACCCATCATCAAAGAATGCATTCCTCCGTGGGAAAAATTGCTGGAACATACCAAGGCTTACCAGAAGCTGTTGACCGCTCGATCAACTTGA 672 0.4583 MASESVTLLGSWASPFALRVIWALKLKGIQHEYIEEDLVNKSPRLLQYNPVYKKIPVLVHNGRSVVESLVIIEYIDETWKQTPLLPQDPYERTKARFWAKFADDKCVPAILGTLLKKGEEQEKAAQEAQEILKTLQDGLEGKPFFGGETIGFADIAIGWLGVWVRICEEITGKVMINTETMPLLDAWFHRFLGLPIIKECIPPWEKLLEHTKAYQKLLTARST* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01275 223 FunFam Tau class glutathione S-transferase 1 87 - -
Pte16g01275 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Pte16g01275 223 Gene3D Glutaredoxin 1 84 - -
Pte16g01275 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Pte16g01275 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Pte16g01275 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Pte16g01275 223 Gene3D - 85 222 - -
Pte16g01275 223 FunFam Tau class glutathione S-transferase 85 221 - -
Pte16g01275 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Pte16g01275 223 CDD GST_N_Tau 6 79 - -
Pte16g01275 223 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Pte16g01275 223 Pfam Glutathione S-transferase, C-terminal domain 116 195 IPR004046 -
Pte16g01275 223 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Pte16g01275 223 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Pte16g01275 223 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01275 Pte-Chr16 32385198 32386530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01275 4 213 Glutathione S-transferase Gene Family AT3G09270 53.774 1.52e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01275 K00799 - cit:102610558 313.153