Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01255 ATGGAGAGCAAAAGTGCGGTACCAGTTCCACATACAGGCAAACCTATAAGATGCAAAGCTGCAATTTGCAGAAGCCCAGGTGAGCCTCTTGTGATTGAGGAAATACAAGTAGACCCACCTAAAGCATGGGAGGTTCGGATCAAGATAATCTGCACATCTCTCTGTCATTCTGATGTCACTTTCTGGAAAATGAAAGGGCCTCTAGCAGTCTTCCCCAGAATTTTAGGGCATGAAGCTGTTGGGGTTGTTGAAAGTGTGGGAGAGAATGTGGAGGAAGTAAAAGAAGGTGACAAGGTGGTGCCAGTCTTCCATCCAAACTGTGGGTACTGCAGAGATTGCAAAAGCAACAAAAGTAATTGCTGCACAGCGTTCCGGTCAGAACCCAAACAACAATTCGCCATGCCAAGAGATGGAAGCAGTAGATTCAAGGACATGAATGGCGAGACAGTGCATCATTTCATTCAGGTCTCAAGTTTTGCTGAGTACACAGTGGTGGATATTGCCAATTTGGTCAAAATCAGCGACGACCTTCCTGTCAATATAGGTTGCCTTCTTAGCTGTGGAGTATCAACAGGCATAGGAGCTGCATGGAAGGTAGCGGACGTCGAAGAGGGATCCACAGTTGCTATCTTTGGCCTCGGCACAATAGGACTCGCTGTTGCTGAAGGTGCAAGGCATCGAGGAGCTTCAAAGATCATAGGCATTGATTTGAATGCAGAAAAATTTGAGCTAGCAAAGAGTTTTGGAGTTACAGATTTTGTAAACCCTGCCACCTGCAAGGATAAGCCCGTGAGCGAGGTAATTAAGGAAATGACAGATGGGGGTGCTGACTACTGCTTTGAGTGCATCGGCTTAGCATCACTCATGGCGGATGCCTTCAACAGCAGCAGAGAGGGTTGGGGGAAGACAGTCATTTTGGGTGTGGAAATGCATGGCACACCATTCACCGTTGGCCCGTATGATATTCTGAGGAATAGGACTATTGTGGGGGCACTTTATGGAGGTCTCAAACCCAAATCTGACATTCCTATCCTTGCTAACAAGTATTTGAACAAGGAGCTCCATGTCGACAAGTTTATAACTCATGAGGTTGGCTTTCATGATATCAACAAAGCTTTCCAGTATCTATTACAGGGGAAGAGCCTTCGTTGCATTATATGGATGGACAAATAG 1173 0.4604 MESKSAVPVPHTGKPIRCKAAICRSPGEPLVIEEIQVDPPKAWEVRIKIICTSLCHSDVTFWKMKGPLAVFPRILGHEAVGVVESVGENVEEVKEGDKVVPVFHPNCGYCRDCKSNKSNCCTAFRSEPKQQFAMPRDGSSRFKDMNGETVHHFIQVSSFAEYTVVDIANLVKISDDLPVNIGCLLSCGVSTGIGAAWKVADVEEGSTVAIFGLGTIGLAVAEGARHRGASKIIGIDLNAEKFELAKSFGVTDFVNPATCKDKPVSEVIKEMTDGGADYCFECIGLASLMADAFNSSREGWGKTVILGVEMHGTPFTVGPYDILRNRTIVGALYGGLKPKSDIPILANKYLNKELHVDKFITHEVGFHDINKAFQYLLQGKSLRCIIWMDK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01255 390 FunFam Alcohol dehydrogenase 6 21 204 - -
Pte16g01255 390 Gene3D - 21 383 - -
Pte16g01255 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 351 IPR036291 -
Pte16g01255 390 PANTHER ALCOHOL DEHYDROGENASE 13 386 - -
Pte16g01255 390 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
Pte16g01255 390 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 76 90 IPR002328 GO:0008270|GO:0016491
Pte16g01255 390 FunFam S-(hydroxymethyl)glutathione dehydrogenase 192 331 - -
Pte16g01255 390 Pfam Zinc-binding dehydrogenase 216 335 IPR013149 -
Pte16g01255 390 SUPERFAMILY GroES-like 339 387 IPR011032 -
Pte16g01255 390 SUPERFAMILY GroES-like 12 198 IPR011032 -
Pte16g01255 390 Gene3D - 192 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01255 Pte-Chr16 32219832 32223729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01255 44 187 Monolignol Biosynthesis Gene Families AT4G39330 30.345 2.65e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01255 K00121 - zju:107420743 568.54