Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01254 ATGGACATCAACAGCAGTATCGCACCACAACCAAATGCTGGCAAACCGATAAGATGCAAAGCTGCAATTTGCAGAAGCCCAGGTGAGCCCCTTGTGATTGAGGAAATACAAGTAGACCCACCTAACGCATGGGAGGTTCGGATCAAGATAATCTGCACATCTCTCTGTCATTCCGATGTCACTTTCTGGAAAATGAAAGAGGGGCCTCTAGCAGTCTTCCCCAGAATTCTGGGGCATGAAGCTGTTGGTGTTGTTGAAAGTGTGGGAGATAATGTGGAGGAAGTGAAGGAGGGTGACAAGGTGCTGCCAGTTTTCCTTCCCAACTGTGGGGACTGCAGAGATTGCAAAAGCAACAAAAGCAATTGCTGCACAATATTTGGGTCCGAATTCAAGGTTGACATGCCAAGATATGGCACTAGCAGGTTCAGAGACATGAAAGGCGAGAGCTTGCATCATTTCATTGGAGTGTCAAGCTTTTCTGAGTACACGGTGGTGGATGTGGTCCAGCTGGTCAAAATTACAGATGAGATTTCAGTTGAAAAGGCTTGCTTGCTTAGTTGTGGAGTATCAACAGGAGTTGGAGCTGCATGGAAGGTAGCAGACGTAGAGAAGGGATCCACTGTTGCTATCTTTGGCCTTGGTACCATAGGACTCGCAGTTGCTGAGGGTGCAAGGCAACGAGGAGCTTCAAAGATCATAGGCATTGATTTGAATCCAGACAAATTTGAACTAGCAAAGAGTTTTGGTGTTACTGATTTTATAAACCCTGCGGACTGCGTGGATAAGCCTGTCAGAGAGGTCATTAAGGAAATTACTGATGGGGGTGCCGACTATTGCTTTGAGTGCATTGGCTTAGCATCACTCATGGAGGATGCATTTAGCAGCAGCAGAGAGGGTTGGGGCAAAACAATAATCTTGGGTGTGGAGATGCACGGGGCATCTTTGACTGTCAGCTCGTATGAGATTCTGAAGAACAGAACTATCGTAGGCTCATACTTCGGGGGTCTCAAAGCTAAAACTGACATTCCTTTCCTTGCAAACAAGTGCTTAAGCAAGGAGCTCAATCTGGACAAGTTTATAACTCATGAGCTGGGGTTTCGTGATATCAATAAAGCTTTCGAGTACATGTTGCAGGGAAAGAGCCTTCGTTGCGTCATATGGATGGACAAATAG 1173 0.4621 MDINSSIAPQPNAGKPIRCKAAICRSPGEPLVIEEIQVDPPNAWEVRIKIICTSLCHSDVTFWKMKEGPLAVFPRILGHEAVGVVESVGDNVEEVKEGDKVLPVFLPNCGDCRDCKSNKSNCCTIFGSEFKVDMPRYGTSRFRDMKGESLHHFIGVSSFSEYTVVDVVQLVKITDEISVEKACLLSCGVSTGVGAAWKVADVEKGSTVAIFGLGTIGLAVAEGARQRGASKIIGIDLNPDKFELAKSFGVTDFINPADCVDKPVREVIKEITDGGADYCFECIGLASLMEDAFSSSREGWGKTIILGVEMHGASLTVSSYEILKNRTIVGSYFGGLKAKTDIPFLANKCLSKELNLDKFITHELGFRDINKAFEYMLQGKSLRCVIWMDK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01254 390 FunFam Alcohol dehydrogenase 6 22 205 - -
Pte16g01254 390 Gene3D - 23 384 - -
Pte16g01254 390 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Pte16g01254 390 Pfam Zinc-binding dehydrogenase 216 336 IPR013149 -
Pte16g01254 390 SUPERFAMILY GroES-like 338 387 IPR011032 -
Pte16g01254 390 FunFam S-(hydroxymethyl)glutathione dehydrogenase 192 331 - -
Pte16g01254 390 Pfam Alcohol dehydrogenase GroES-like domain 45 173 IPR013154 -
Pte16g01254 390 Gene3D - 192 331 - -
Pte16g01254 390 SUPERFAMILY GroES-like 13 197 IPR011032 -
Pte16g01254 390 PANTHER ALCOHOL DEHYDROGENASE 14 386 - -
Pte16g01254 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 350 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01254 Pte-Chr16 32200726 32204804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01254 45 190 Monolignol Biosynthesis Gene Families AT4G37970 29.333 1.23e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01254 K00121 - zju:107420743 601.668