Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01252 ATGGCGGTTGCTCCCTCTCCACGTGAAGAGAACGTGTACATGGCTAAGCTTGCTGAGCAAGCGGAGCGCTACGAGGAAATGGTGGAGTTCATGGAGAAGGTGTCGGCGGCCGTTGAGAACGAGGAGCTCTCTGTTGAGGAGAGGAACCTTCTCTCCGTTGCTTACAAGAACGTCATCGGTGCTAGACGTGCCTCCTGGCGTATCATCTCCTCTATTGAACAGAAGGAGGAGAGTCGGGGCAACGAAGACCATGTCACCATGATCCGTGACTACCGATCTAAGATTGAGACCGAGCTGTCTCAAATCTGCGACGGGATCCTCAAGCTCCTTGACGCCCGCCTCATCCCTTCCGCCACTTCTGGTGATTCAAAGGTCTTCTACCTCAAGATGAAGGGCGACTACCATAGGTACCTCGCCGAGTTCAAAACGGGCGGCGATCGTAAGGAGGCAGCTGAGAGCACTCTCACAGCTTACAAGTCTGCTCAGGACATTGCCACTGCAGAATTGCCTCCAACACATCCAATCAGACTTGGTCTTGCCCTCAATTTCTCTGTGTTTTACTATGAGATCCTCAACTCCCCAGATCGGGCTTGCAGCCTTGCAAAACAGGCTTTTGATGAAGCCATTGCTGAGTTGGATACGTTGGGAGAGGAGTCATACAAGGACAGCACATTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACTTCTGACATGCAGGATGATGGGGCAGATGAAATTAAAGAAGCACCCAAGCCTGCTGATGAACCGCAGCAATGA 786 0.5178 MAVAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAVENEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTMIRDYRSKIETELSQICDGILKLLDARLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGGDRKEAAESTLTAYKSAQDIATAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKPADEPQQ* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01252 261 PIRSF 14-3-3 3 250 IPR000308 -
Pte16g01252 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Pte16g01252 261 Gene3D - 2 251 IPR036815 -
Pte16g01252 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Pte16g01252 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Pte16g01252 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Pte16g01252 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Pte16g01252 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Pte16g01252 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Pte16g01252 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Pte16g01252 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Pte16g01252 261 FunFam 14-3-3 protein epsilon 4 251 - -
Pte16g01252 261 Coils Coil 14 41 - -
Pte16g01252 261 MobiDBLite consensus disorder prediction 243 261 - -
Pte16g01252 261 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Pte16g01252 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Pte16g01252 261 MobiDBLite consensus disorder prediction 241 261 - -
Pte16g01252 261 SMART 1433_4 8 251 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01252 Pte-Chr16 32191076 32193595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01252 6 260 14-3-3 family AT1G78300 89.494 6.35e-170 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01252 K06630 - qsa:O6P43_015326 483.796