Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01240 ATGGAGAAGGAGAGAGAACATCAGGTTTATTTGGCTAGGCTAGCTGAGCAAGCAGAGAGATATGACGAAATGGTTGAAGCAATGAAGAAAGTTGCTCAACTGGACGTGGAGTTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGATACAAAAATGTAATTGGAGCAAGGAGGGCTTCCTGGCGGATATTGTCGTCAATTGAACAAAAGGAGGAGGCTAAGGGTAATGAACAAAATGTGAAGTGCATAAAGGAATACAGGCAGAGAGTTGAAGATGAACTCGCCAAGATATGCTATGATATCTTATCCGTGATTGACAAGCACCTCATCCCATCTTCCTCAACCGGGGAGTCCACTGTCTTTTACTACAAAATGAAAGGAGACTACTACCGGTACTTAGCTGAGTTCAAATCAGGTGATGAACGTAAAGAAGCTGCTGATCAATCTCTGAAGGCATATGAGGCTGCCACTAGCACTGCTGCCTCTGATTTGACCCCAACACATCCTATCAGACTAGGGCTGGCACTTAACTTTTCAGTCTTCTACTATGAAATTTTGAATTCGCCAGAGAGAGCCTGCCACCTGGCTAAGCAAGCTTTTGATGAGGCGATTGCTGAATTAGACAGTCTCAATGAAGAATCTTACAAGGATAGTACTCTCATTATGCAGCTTCTAAGGGATAATCTGACTCTTTGGACTTCAGACCTGCCTGAGGAGGGAGCTGAGCAATCCAAAGGTGATGAAGTGCACGCAGCGGTAAGTTAA 765 0.4471 MEKEREHQVYLARLAEQAERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKCIKEYRQRVEDELAKICYDILSVIDKHLIPSSSTGESTVFYYKMKGDYYRYLAEFKSGDERKEAADQSLKAYEAATSTAASDLTPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGAEQSKGDEVHAAVS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01240 254 Gene3D - 1 246 IPR036815 -
Pte16g01240 254 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Pte16g01240 254 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Pte16g01240 254 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Pte16g01240 254 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Pte16g01240 254 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Pte16g01240 254 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Pte16g01240 254 SMART 1433_4 5 246 IPR023410 -
Pte16g01240 254 PIRSF 14-3-3 1 247 IPR000308 -
Pte16g01240 254 Coils Coil 11 31 - -
Pte16g01240 254 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Pte16g01240 254 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Pte16g01240 254 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Pte16g01240 254 FunFam 14-3-3 protein epsilon 1 246 - -
Pte16g01240 254 PANTHER 14-3-3 PROTEIN 5 235 IPR000308 -
Pte16g01240 254 Pfam 14-3-3 protein 11 233 IPR023410 -
Pte16g01240 254 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01240 Pte-Chr16 32086504 32089421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01240 1 246 14-3-3 family AT1G34760 84.959 1.85e-156 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01240 K06630 - cit:102628987 460.685