Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01237 ATGGATAGTTTTTGTTGTTTCAAGTCTCCCTACTCTGAGCTTGTAGGGGTGCGTACTGGGAAGGGTAAAGACTGTGAAGGTGTAATAAGATATGGATTCAGCCTTGTAAAAGGGAAAGCTAATCATCCGATGGAAGATTATCATGTAGCTAAGTTTGAACAGAGAACTGGATACGAATTGGGCTTATTTGCAATCTATGATGGCCATCTGGGAGATCGTGTTCCTGCTTACTTGCAGATACATTTACTTCCCAATATCTTAAAGGGGGAGGACTTCTGGATTGATCCTGCCAGATCTATTATGAAAGCATATGAAAGAACAGATCAGGCAATCCTTTCACACAGTTCTGACCTTGGACGTGGTGGATCAACTGCTGTAACTGCAATTTTGATTAATGGCCGCAGGTTATTGGTGGCCAATGTCGGGGATTCACGTGCAGTTCTGTCAAGAGGAGGTCAGGCTGTACAGATGAGTATAGATCATGAGCCCAACACAGAGAGGGGCAGCATAGAGGATAAAGGTGGATTTGTCTCAAATATGCCAGGAGATGTCCCTAGAGTAAATGGTCAACTGGCTGTTTCTCGTGCATTTGGGGACAAGAGCCTCAAATCACATTTGCGTTCAGATCCAGACATAGAAATTGCTGATATAGATGATGATACTGATATTCTAATTCTCGCTAGCGATGGCCTTTGGAAGGTAATGACTAATCAAGATGCTGTTGATATAGCAAGAAAGATTCGAGACCCCCAGAAAGCAGCTAAACAACTGACCGTTGAGGCTTTGAAAAGAGACAGTAAAGACGATATAAGTTGCATTGTAGTTAGGTTCAGGTGA 837 0.4289 MDSFCCFKSPYSELVGVRTGKGKDCEGVIRYGFSLVKGKANHPMEDYHVAKFEQRTGYELGLFAIYDGHLGDRVPAYLQIHLLPNILKGEDFWIDPARSIMKAYERTDQAILSHSSDLGRGGSTAVTAILINGRRLLVANVGDSRAVLSRGGQAVQMSIDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIEIADIDDDTDILILASDGLWKVMTNQDAVDIARKIRDPQKAAKQLTVEALKRDSKDDISCIVVRFR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01237 278 FunFam Probable protein phosphatase 2C 39 22 278 - -
Pte16g01237 278 SUPERFAMILY PP2C-like 28 277 IPR036457 -
Pte16g01237 278 SMART PP2C_4 26 275 IPR001932 -
Pte16g01237 278 CDD PP2Cc 29 277 IPR001932 -
Pte16g01237 278 Pfam Protein phosphatase 2C 39 270 IPR001932 -
Pte16g01237 278 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
Pte16g01237 278 PANTHER PROTEIN PHOSPHATASE 30 277 IPR015655 GO:0004722|GO:0006470
Pte16g01237 278 Gene3D - 26 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01237 Pte-Chr16 32057290 32060665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01237 1 279 PP2C-type Phosphatase Gene Family AT1G22280 71.034 4.48e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01237 K17506 - qsa:O6P43_019638 449.899