Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01212 ATGGGGTCAATGCAAGATGAAACTTTGACAATGGAGGAGCACAGGAAAACTTATCGTGAGAATTCAAGTCAGCCAGAAAGGATTCACTGGTTACTTGATCCTCCCAAGCCACCCAATGCATTGGAAATGTCCTTCTCTTCAATCAGAGAGACTGTCTTACCTCATGGCAGAAAGCTCTCACCTTCACCTGGCAAGAGAATTCAGTCTAGATACATCATGTCATTCTTGGAAAGCCTGTTTCCTATACTTAGCTGGGGAAGAAACTACAAAGCATCAAAGTTCAAAAAGGATGTGTTAGCTGGTTTAACACTGGCAAGCCTGAGCATACCTCAGAGCATTGGGTATGCCAATTTAGCAAAACTTGAACCACAATATGGCCTGTATACAAGTGTTGTTCCACCCCTTATATATGCTTCGATGGGGAGTTCAAGAGAAATCGCGGTGGGACCTGTGGCTGTTGTGTCACTGCTGCTGTCCTCCATGATACAGAACGTAGAAGATCCCATTGCAAATCCTCTGGCCTACCGAAATCTTGTTTTCACTGTAACCTTATTTGCAGGGATCTTCCAAACGGCTTTTGGAATTTTAAGGTTGGGCTTTCTTGTTGATTTCCTTTCACATGCTGCTCTAGTTGGATTCATGGCAGGTGCTGCCATCATCATTGGTCTTCAGCAACTCAAGGGGTTGCTTGGTATTAGTCATTTCACCACGAAAACTGATGTGGTATCAGTCTTGGGGTCTGTTGCGAATTCTATACACCATCAAATAATATCCCGAGAAAAATGGTATCCTTTGAATTTCGTCCTTGGTGCTTCTTTTCTGATAGTCATTCTCACAACCAGGTTTATTGGAAGAAGGAACAAAAAGTTGTTCTGGTTACCAGCTATTGCTCCCCTTACATCAGTTATACTGTCGACTTTGATTGTCTATTTGACAAAAGCTGATGAGCATGGCGTTATTATTATAAAACACATTAAAGGAGGCATAAATCCTGCTTCAGTTCACCAGTTACAACTTCATGGTCCCCATGTGGGGAAAGCTGCCAAAATTGGTCTGATCATTGCAATTGTGGCTCTCACTGAAGCGATAGCAGTGGGACGATCTTTTGCTTCCATCAAGGGATATCATCTTGATGGGAACAAAGAAATGTTATCAATGGGCTTCATGAACATCGTAGGATCCTTGACATCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTGAATTTCAGCGCTGGATGTCAAACAGCAGTATCTAACATTGTGATGGCCATAACTGTTCTTCTGTCGCTGGAATTATTGACAAGGCTCTTATATTTCACTCCTGTGGCTATACTTGCCTCAGTCATCCTCTCTGCACTCCCAGGGCTAATTGATATAAACAAAGCCTGTTATATCTGGAAAGTGGACAAACTGGATTTTCTTGCTTGTCTAGGTGCTTTTCTTGGTGTCTTGTTTGCTTCAGTGGAAATTGGTCTTCTTGCTGCAGTGACAATATCGTTTGCTAAGATACTACTACAATCAATTAGACCCGGCATAGAGGTATTAGGCAGACTTCCAATGACAGACACCTTCTGTGACATAAGACAGTTTCCGATGGCCACAAGGACTCCTGGCATCCTGATTATTCGCATGAGCTCTGGCACACTATGCTTTGCAAATGCTAATTTTGTGAGAGAAAGGATAATGGAGAAAGTGGCAGAAGAACAAGATGATGTCACAGAAAGTGGCAAGGGAAAATCTCAAGCAGTTATTTTGGACATGTGCAATTTGATTAACGTTGACACTTCGGGAATTCTGACATTGGAAGAACTGCACAAGAAGTTGGCGTCAAGGGGCATCAAATTGGCACTAGTCAATCCAAGATGGCACGTGATTCACAAGTTCAAAGTGGCTGAATTTATGGATAAAATCGGAAGAGGATCGGTTTTTCTTACAGTTGAGGAAGCTGTAGAAGCTTGCCTACGTTCTTCCAGTGTTGCTCACCCTTAA 1998 0.4269 MGSMQDETLTMEEHRKTYRENSSQPERIHWLLDPPKPPNALEMSFSSIRETVLPHGRKLSPSPGKRIQSRYIMSFLESLFPILSWGRNYKASKFKKDVLAGLTLASLSIPQSIGYANLAKLEPQYGLYTSVVPPLIYASMGSSREIAVGPVAVVSLLLSSMIQNVEDPIANPLAYRNLVFTVTLFAGIFQTAFGILRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGISHFTTKTDVVSVLGSVANSIHHQIISREKWYPLNFVLGASFLIVILTTRFIGRRNKKLFWLPAIAPLTSVILSTLIVYLTKADEHGVIIIKHIKGGINPASVHQLQLHGPHVGKAAKIGLIIAIVALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVLLSLELLTRLLYFTPVAILASVILSALPGLIDINKACYIWKVDKLDFLACLGAFLGVLFASVEIGLLAAVTISFAKILLQSIRPGIEVLGRLPMTDTFCDIRQFPMATRTPGILIIRMSSGTLCFANANFVRERIMEKVAEEQDDVTESGKGKSQAVILDMCNLINVDTSGILTLEELHKKLASRGIKLALVNPRWHVIHKFKVAEFMDKIGRGSVFLTVEEAVEACLRSSSVAHP* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01212 665 Gene3D STAS domain 512 659 IPR036513 -
Pte16g01212 665 NCBIfam sulfate permease 81 652 IPR001902 GO:0016020|GO:0055085
Pte16g01212 665 FunFam Sulfate transporter 31 512 659 - -
Pte16g01212 665 CDD STAS_SulP_like_sulfate_transporter 533 649 - -
Pte16g01212 665 Pfam STAS domain 535 652 IPR002645 -
Pte16g01212 665 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Pte16g01212 665 SUPERFAMILY SpoIIaa-like 538 656 IPR036513 -
Pte16g01212 665 PANTHER SULFATE TRANSPORTER 62 658 IPR001902 GO:0016020|GO:0055085
Pte16g01212 665 MobiDBLite consensus disorder prediction 1 28 - -
Pte16g01212 665 Pfam Sulfate permease family 94 480 IPR011547 GO:0016020
Pte16g01212 665 ProSiteProfiles STAS domain profile. 549 656 IPR002645 -
Pte16g01212 665 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01212 Pte-Chr16 31861260 31865780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01212 19 657 Inorganic Solute Cotransporters AT5G10180 64.275 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01212 K17469 - gmx:100776591 955.281