Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01197 ATGGGTATATGTGCGCCACTCCACCAGGTTTGCATGTGGAGTGACACCTTTAGAGGTGATGACACTCTAAACCGTAGTCCCCCCACATTCTTACCTGTCAATATTGTGATGGATAACAGCAACTCAGAACTTATTCCCAATGCACCAAGTCTACCTTCTGGGAGTGATCAAGAAGCAGATAAGCCTGTTGATAAGGTGAAAAGAAGGCTGGCACAAAATCGTGAAGCTGCTCGAAGAAGTCGGTTAAGGAAAAAGGCATATGTTAAACAATTAGAGACCAGCCGTATGAAGCTTATTCAATTGGAGATGGAAATTCACAAAACTAGAAAGCAGAGTCTTTACCTGGGCCGTGCACTAGATGCCAGTCATCTGGGGATATCTGGAACTTTGAACAAAGGTGTTGCTGTTTTTGAGATTGACTATGGAAATTGGGCTGAAGAGCAAAATAGACAGAACTCTCATTTTAGAAATGCATTACAAGCTCATCTCCCTGATTTGCAGCTCCATATACTAGTTGAAAACTGCTTGAACCACTATGGCAGCCTTTTCCGAATGAAAGCAGACGCTGCAAAGGCAGACGTCTTCTATGTTATCTCCGGTGCATGGAGGACACCCTTAGAATGCTTCTTTCTTTGGATTGGAGGACCCCGTCCTTCAGAACTTCTGAATGTTGTCTTGCCACAACTGGAGCCGCCATTGACTGAACAGCAACTTGTCAGTATCAAAAATCTTCGCCACTCAACTCAGCAAGCTGAAGACGCTCTCTCTCAGGGATGGGATAAGCTGCAGCAGGTTCTGGCTCAAAGCATAGCTGTAGATGCTATTCTTGCTGAAGACTACGGATCCCAAACAGCTGCTTCGGTTGATAAGGAAGCACTTGAAGGGTTTGTCAACCAGGCAGATCACTTGAGACAACAGTCTCTACAACACATGTCTCGCATCCTGACAACCCACCAAGCTGCAAGAGGGCTGCTTGCTCTAGGAGAGTACTTTCAGCGTCTCCGAGGCCTGAGTTCTCTTTGGGGTTCTCGTACTTCCAAAATTCCAGCTGCCTTGTAA 1059 0.4589 MGICAPLHQVCMWSDTFRGDDTLNRSPPTFLPVNIVMDNSNSELIPNAPSLPSGSDQEADKPVDKVKRRLAQNREAARRSRLRKKAYVKQLETSRMKLIQLEMEIHKTRKQSLYLGRALDASHLGISGTLNKGVAVFEIDYGNWAEEQNRQNSHFRNALQAHLPDLQLHILVENCLNHYGSLFRMKADAAKADVFYVISGAWRTPLECFFLWIGGPRPSELLNVVLPQLEPPLTEQQLVSIKNLRHSTQQAEDALSQGWDKLQQVLAQSIAVDAILAEDYGSQTAASVDKEALEGFVNQADHLRQQSLQHMSRILTTHQAARGLLALGEYFQRLRGLSSLWGSRTSKIPAAL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01197 352 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Pte16g01197 352 Coils Coil 91 111 - -
Pte16g01197 352 FunFam BZIP family transcription factor 64 113 - -
Pte16g01197 352 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 63 98 IPR004827 GO:0003700|GO:0006355
Pte16g01197 352 PANTHER TRANSCRIPTION FACTOR TGA9 3 345 - -
Pte16g01197 352 Pfam bZIP transcription factor 64 104 IPR004827 GO:0003700|GO:0006355
Pte16g01197 352 Pfam Seed dormancy control 153 226 IPR025422 GO:0006351|GO:0043565
Pte16g01197 352 MobiDBLite consensus disorder prediction 42 63 - -
Pte16g01197 352 SUPERFAMILY Leucine zipper domain 66 108 IPR046347 GO:0003700|GO:0006355
Pte16g01197 352 ProSiteProfiles DOG1 domain profile. 134 344 IPR025422 GO:0006351|GO:0043565
Pte16g01197 352 Gene3D - 64 119 - -
Pte16g01197 352 SMART brlzneu 61 121 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01197 Pte-Chr16 31728969 31731799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01197 1 344 Calmodulin-binding Proteins AT1G77920 54.596 2.36e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte16g01197 DOG1 2.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01197 K14431 - qsa:O6P43_019693 449.129