Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01192 ATGTCACTGCAGAATATTGGTGCATCAAACCGTGATGATGCCTTCTATAGGTATAAGATGCCAAAGATGGTTACTAAGATTGAAGGTAGAGGGAATGGCATCCGAACTAACGTGGTTAACATGGTTGATATTGCAAAAGCCTTAGCCAGACCTGCTTCTTATACCACCAAATATTTTGGCAATGAGCTTGGAGCTCAATCCAAGTTTGATGAGAAGACAGGAACTTCTCTTGTCAATGGGGCCCACGATACGTCAAAACTTGCTGGCTTGCTTGAGAACTTCATCAAGAAATATGTTCAATGTTATGGTTGTGGGAACCCTGAGACAGAGATAGTTATTACTAAAGCGCAGATGATCACCCTAAAATGTGCTGCATGTGGTTTTGTTTCTGATGTTGATATGAGGGATAAGCTTACTACATTTATTCTGAAAAATCCTCCTGAACAGAAAAAGGGATCCAAAGATAAGAAAGCCATGAGGAGGGCGGAGAAAGAGAGACTCAAGGAGGGAGAGGCGGCTGATGAGGAGCTAAAGAAGCTCAAAAAGGAGACAGTGAAGAAGAAAGTGTCTTCAGGAAGTTCAAAGGATCCTGCTTCTAAGACATCAAAGAAGAAGGGCAATGTTTCTGATGAGGATCACTCTCCAGATCACAGTCTGCCAGATGAAAATGAACAAGCACATAATGATGATGAAGATGATGGCGTTGAATGGCAGACAGATACTTCACTGGAAGCAGCTCGACAGCGCATTCAGGAGCAGTTGAGTGCTGCTACTGCTGACATGGTTATGCTTTCTACAGATGAGAAGAAGCCATCGAAAAAATCTGCTGAGCCTGAAGTCAAACCAACCAAAGAAAATGGGAATGGTGTTGTTACCCATGGGAAGCTTGTTGATGACATAAAGGATTATCTAGGGAAGGGTTGCTCTGTGAACCAGCTCACATCTTTTATTGGATCTCTTCCTGGGAGTTCCCAAGAAGTTACTAACGCTTTATTTGAAGCTCTCTTTGACAATGTTGGCAAGGGTTTTGCCAAAGCAGCAACAAAGAAGAAGAATTATCTGGCTGCGGCAACTCAGGTGGGATCACAGATGATTTTGTTGCATACAATGGAGTCATTCTGTACGAAGGCGAGCCCTGATGCTGTAAAGGAAGTGGCTTTAGTTTTGAAGGACCTGTATGACTCGGATTTGTTGGAGGAGGAATCTATACTTGAGTGGTATCAACAGGGTCTGGCTGGCAGCAACAAATGTTCTCAGGTATGGAAGAGTGTTAAGCCGTTTATTGAATGGCTCCAGAATGCTGAATCTGAAACGGAAGAAGAATGA 1326 0.4314 MSLQNIGASNRDDAFYRYKMPKMVTKIEGRGNGIRTNVVNMVDIAKALARPASYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEIVITKAQMITLKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKETVKKKVSSGSSKDPASKTSKKKGNVSDEDHSPDHSLPDENEQAHNDDEDDGVEWQTDTSLEAARQRIQEQLSAATADMVMLSTDEKKPSKKSAEPEVKPTKENGNGVVTHGKLVDDIKDYLGKGCSVNQLTSFIGSLPGSSQEVTNALFEALFDNVGKGFAKAATKKKNYLAAATQVGSQMILLHTMESFCTKASPDAVKEVALVLKDLYDSDLLEEESILEWYQQGLAGSNKCSQVWKSVKPFIEWLQNAESETEEE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01192 441 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pte16g01192 441 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Pte16g01192 441 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Pte16g01192 441 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Pte16g01192 441 MobiDBLite consensus disorder prediction 148 190 - -
Pte16g01192 441 SMART 542_3 351 437 IPR003307 GO:0005515
Pte16g01192 441 MobiDBLite consensus disorder prediction 198 224 - -
Pte16g01192 441 MobiDBLite consensus disorder prediction 143 236 - -
Pte16g01192 441 ProSiteProfiles W2 domain profile. 270 441 IPR003307 GO:0005515
Pte16g01192 441 MobiDBLite consensus disorder prediction 265 291 - -
Pte16g01192 441 Gene3D - 293 441 - -
Pte16g01192 441 Gene3D - 105 145 - -
Pte16g01192 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 440 IPR045196 GO:0003743|GO:0006413
Pte16g01192 441 CDD W2_eIF5 292 439 - -
Pte16g01192 441 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 441 IPR003307 GO:0005515
Pte16g01192 441 MobiDBLite consensus disorder prediction 266 281 - -
Pte16g01192 441 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Pte16g01192 441 SUPERFAMILY ARM repeat 295 435 IPR016024 -
Pte16g01192 441 Gene3D - 2 104 - -
Pte16g01192 441 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01192 Pte-Chr16 31674374 31676824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01192 1 434 Eukaryotic Initiation Factors Gene Family AT1G77840 65.702 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01192 K03262 - csv:101210873 603.979