Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01185 ATGCTTCCTCTTGAGGTCGGGACTCGCGTTATGTGCCGTTGGAGGGACGGGAAGTTTCATCCTGTCAAGGTCATCGAACGGAGAAAGGTGCAGGCTGAAGGGTCTAACGATTATGAATACTACGTCCATTACACTGAGTTCAACCGTAGGCTTGATGAATGGGCGAAGCTTGACCAACTTGATCTTGATTCAGTAGAAGCTGTCGTTGATGAGAAGGTGGAGGATAAGGTTACTAGCTTGAAGATGACCCGCCACCAGAAAAGGAAGATTGATGAGACTCATGTTGAGGGTCATGAGGAACTTGATGCTGCCAGCTTGCGTGAACATGAGGAATTCACAAAAGTTAAAAATATAGCTACCGTTGAACTTGGGAGATATGAGATTGAGACATGGTACTTCTCACCCTTCCCACCAGAATACAATGACTGTGTAAAACTGTACTTTTGTGAATTTTGCCTCAATTTCATGAAACGAAAAGAGCAGCTTCAAAGGCATATGAGAAAGTGCGACCTGAAGCACCCTCCTGGTGATGAGATATATAGAAGTGGTACTCTGTCTATGTTTGAGGTCGATGGTAAAAAGAACAAAGTTTATGGGCAGAATTTATGTTATTTGGCAAAATTGTTTCTTGATCACAAGACCCTCTATTATGATGTAGACCTATTTCTTTTCTATGTTCTCTGCGAGTGTGATGATCGAGGATGCCATGTGGTTGGCTATTTTTCTAAGGAAAAACACTCAGAGGAATCATATAATTTGGCTTGTATCCTTACCCTTCCTCCTTACCAGAGAAAAGGCTACGGGAAGTTCTTGATAGCTTTCTCTTATGAGCTCTCGAAGAAAGAATGCAAAGTCGGCACACCCGAGAGACCCCTTTCAGACCTTGGTTTATTGAGCTACCGAGGATATTGGACCCGGGTTCTTCTAGACATATTAAAAAAGCACAAGGGTAACATTTCTATTAAGGAGCTTAGTGATATGACGGCCATAAAGGCAGAAGATATACTGACTACCCTCCAGAGCCTGGAACTGATCCAGTACAGAAAGGGTCAGCATGTCATTTGCGCAGATCCTAAGATTTTGGATCGTCATCTTAAAGCTGCTGGTCCTGGGGGTCTTGATGTTGACGCTAGCAAACTGATCTGGACTCCATACAAAGAACAAGGCTGA 1170 0.4342 MLPLEVGTRVMCRWRDGKFHPVKVIERRKVQAEGSNDYEYYVHYTEFNRRLDEWAKLDQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATVELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHVVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKECKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKILDRHLKAAGPGGLDVDASKLIWTPYKEQG* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01185 389 CDD NAT_SF 225 281 - -
Pte16g01185 389 Gene3D - 292 372 IPR036388 -
Pte16g01185 389 Gene3D - 1 113 - -
Pte16g01185 389 FunFam Histone acetyltransferase 112 169 - -
Pte16g01185 389 Gene3D - 114 170 - -
Pte16g01185 389 FunFam Histone acetyltransferase 172 300 - -
Pte16g01185 389 FunFam Histone acetyltransferase 292 370 - -
Pte16g01185 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 114 385 IPR016181 -
Pte16g01185 389 SUPERFAMILY Chromo domain-like 3 114 IPR016197 -
Pte16g01185 389 Gene3D - 172 384 - -
Pte16g01185 389 FunFam Histone acetyltransferase 1 113 - -
Pte16g01185 389 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 113 384 IPR002717 GO:0004402|GO:0006355|GO:0016573
Pte16g01185 389 PANTHER HISTONE ACETYLTRANSFERASE 12 385 - -
Pte16g01185 389 Pfam MOZ/SAS family 174 351 IPR002717 GO:0004402|GO:0006355|GO:0016573
Pte16g01185 389 Pfam MYST family zinc finger domain 115 169 IPR040706 -
Pte16g01185 389 CDD CBD_MOF_like 7 76 - -
Pte16g01185 389 SMART chromo_7 18 77 IPR000953 -
Pte16g01185 389 Pfam RNA binding activity-knot of a chromodomain 4 62 IPR025995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01185 Pte-Chr16 31624604 31628452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01185 1 390 C2H2 Transcription Factor Family AT5G64610 92.051 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01185 K11308 - cit:102608219 775.007