Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g01184 | ATGCGTTGGTGGTGGTGCACGGTGTTGTTGTCGGTGATGACCGGAGAACGATTTAGTCGCCGGAAAAAGATGATGGGTCAGGGCGAGGAAGTTGGTTGTGGCGCCGAGGAGAGACCATGCCCGGCTTCTAGGGTTCCGGCCAAACTTCCAACGGAGAGTTGTAGGTTGGGGTTGAAAGCGAAAGAGGACACTGGTTCTCCCGGGATTGATTTTTATTCTCAGGCGAGGAAAGCGCTTTGTGAGCGTTCGCCTTTCGATGTGGCGGTGGAGTCTACTTCCGGTTCAGTTAGTGTAACTACTTTGCCCAGTGGTTTGGCCAGCTCATTGAATAGGCACTCTGAGAGAAGGAGACGTCCCAGGAAGTCTCATTCAGGATCCGACAAGAAATCTTCTAGAGGAGGGGATAGGTCGCGGGGTAATAGTATTTGGGTGGAGACAGAGGAGTACTTCAGAAACTTGTCACTGCCCGACATCGACCATATATTCCAGCTATCTTCTTTTAGTGATTTAGCAACTAGAAAGTGTTTTTCCATTCCCCATTTGGAACATCGGCCTAGTACTTCCAATGCAGATGAGGTTGTTAGTGCCAGTGAGATTACTAGAAATGAGAATGTTGATCATGTCAAAAATGAGGATACTTCCATGACAATTGATAATACTGGAGGTGATTTTTCGCCTTCTGTTTACAAAGAATGTTCTAGTTTAGGATGGTTGTTAGGTTGTAGGAATAAGATATCTTTGGCTTCTGAGCGCCCTTCTAAGAAGAGGAAGCTTTTGGGTTGTGATGCAGGGCTAGACAAAGTTTTAATTGCCCGTCCTTGTGAAGGCGATTCTTCTTTATGCCATTATTGTAGCACTGGGGATTCCGGTAATAAGACAAGTGATTTAATTGTTTGCAGTACTTGTAAGGTAGCAGTCCATAGAAAGTGCTACGGTGTGAAAGATGGTGCCGATGAACCCTGGTTATGTGCCTGGTGTAAACAAAACGATGGCGCTGGCCCTGTTGGTGATTCAGTGAGTACTTGTGTGCTTTGTCCTAAGAAGGGTGGTGCTCTGAAGCCTGCTTATAAAAATGTTGAAGATGGTGGATCAGTAAAATATGCACATTTGTTTTGCTGTTTGTGGATGCCCGAGGTGTATATAGAGGATCTTACTCGAATGGAGCCTATTATGAATATAAGTGGAATCAAGGAAGCACGCAGAAAATTGGTCTGTAACGTATGCAAGGTGAAGTGTGGTGCCTGTGTTCGGTGCAGCAATGGGGCATGTAGGACTTCTTTTCATCCAATATGTGCAAGAGAGGCAAAGCATAGAATGGAGGTTTGGGCAAAACATGGGAATGGCGATGTTGAGTTGAGGGCATTTTGCTCAAAACATACAGAAACACCAGACAATGTTATTCTCAGGTCTGGCAATTCTTTACCATCTGGTGGTCCTGATAAATTTGGGGGCATGGGGGTCTCTATGGAGGCTTCCGATAAATTTGACGGCAGTGATAGTGAGTCACAGGAGACACTATTATCTGCATCTAAATCAAATGCCATGATCATGATCGAAGGTGATGGTAGACAGCATATTAGTGATGCTGTGGGGCTGGTTGGGAAAAGCCACGAGGATGTTTATCCCTCTGACTCTGTTCATTTTACTATTGTTTTGAAGAAGTTAATTGACCTTGGAAAAGTCGATGTCAAGGATGTAGCTCTAGACGTTGGCATCTCACCAGAGTTATTGATTGCAAATCTTTCTGATGATTGTGTCTCCCCTGAAGTGAGATTCAAGATAGTAACTTGGCTCAAAAATCATGCATATATGAATACATTTCAGAGAAACTTGAGGTCCAGAGTGAAACCAGTCAATTCACACAAAGATGAAATTGGAGATTACATTTGTGATAGTTTAGCTGTATCAGGATCTGACATCATGGATCCTGTTGCTGTTAAGTCTGTACCTCCAAGGAGGCGGACTACAAACAAGATAAGGCTTTTGAAGGATAACAACTTAAAGTCCTCAGGAGATGCAATTTCTAGAGATGTGTTGCATATGGAAGATTGTGAAGCTGATCAACCTGTCATATCTTCTCCTGACAATATGTCCACGAGGCCTGAGAACTCTCGAGCACCTCTTGCAAACAACAGTTCGGATAAACCCTGCAATAGCAGTATGTCTGAAAGGGTTGTAGAAGACGAAGCTGCTACGTCTATGAAGAATTCTGTTGGTGGTACAGATCTATGCTGTCTAGATGCTACAGCTACAAAAACAGCTGGCTCTGCTTTCATAAGTACAGAATTGGTCACTAGTTACATTCATCCTTATGTTAGTGAAAAATTGATGCAAATTCAGAATTGGGCCCCACTAGAATCCATAAGACATTCATGGAAAGGTGATCCCTCTACTGTGGACGGTGTCTTCTGTGATAACCATGATCATCATTCAGAAAATCATGGAGCTGTTACTTGCAACGATCAATCTAATGCAGAACAATTAATCTTAGCTAGGAAAATGAAATTGCTGGAATCTTGTCCAGAAGATGAAGTCGAAGGGGAGATTGTTTACTTCCAGCATAGCTTAATTTCAAATTTAGCTGCAAGGAAACAATTATCTGATAATCTTATATGTAATGTGGTCAAGAGACTTCCACTGGAGATTGATGCAACTCGGCAACAACAATGGGATGCTGTGCTTGTAAATCAGTATCTTAGTGATCTTAAGGAGGCTAAGAAACAAGGTAGAAAAGAAAGAAGGCACAAAGAAGCGCAGGCGGTGCTAGCTGCTGCAACTGCTGCTGCTGCTAATTCTTCCAGGAATTCTTCATTTAGGAAGGATGCTTTGGATGAATCTGCACCACATGAGAATATGTTCAAGATAGATGCTTCAAATGGAAGATCTGGTGTTTCTTCTCAGTTGTTGCCAAGAGCCAGAGAGACACTTTCAAGGGTAGCTGTTACATGTAATTCAACTGAAAAGCATTCTGGACTTGGTATAACAGAGTTAGATCATTCAAGAGAACACCCTAGATCATGTGACATTTGCAGACGGTCTGAAACAATAAACCCTATTTTGATCTGTTCCAGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGAAGTGTGAGAGAATCTATTGGTCCATGGTACTGTGAATTATGCGAAAGTGTGGCTTACAGAACCTCGGGAGTTCCAGCTGTCAATTTTTGGGAGAATCCTCCTTTTATAGTGGAATGTGGTTTGTGTGGTGGCACTACTGGTGCTTTCAGGAAAACCTCTGATGGTCAGTGGGTCCATGCCTTCTGTGCAGAGTGGGTATTTGAGACAACATTCAGAAGAGGACAAGTTCATCCTGTCGAAGGAATGGAAACATTGTTGAGAGGAACTGGTGCATGTTGTATCTGCCGCTGTAAGTGTGGTGTCTGCATTAAGTGCAACTACGGGCACTGCTTGACTATATTTCATCCATCTTGCGCAAGAAGTGCTGGTTTGTACATGAGTGTGAGGACAGTGAATGGAAAACTTCAGCATAAGGCTTACTGTGAGAGGCATAGTTTGGATCAAAGGGCAAAGGCTGAAACTCAAAAGCATGGGACCGAGGAGTTGAAGAACATCAAGCAAATTAGGGTTGAGCTGGAGAGGTTACGCCTACTCTGTGAAAGAATTGTTAAACGCGAGAAAATAAAGCGGGAACTGGTTCTTTGTTCACATGACATACTGGCTTTCAAACGAGATCATGTTACTCATAGTATGCTGGTTCATAATCCTTTCTTCCTTACCGGTGGAAGTTCTGAATCTGCTACCACTTCACTTAAAGGACATACTGATGACTACAGATCGTGCAGTGACACAATGCAAAGATCAGATGATATAACTGTGGATAGCTCAGTTTCTGCTAAGAAACGCACTAGAGTGAGCATGAATGGCAATCAAAGGACAGATGACGATTGTTCAACATCACAAAGTAGTTATAACCGAAATGTCATCATGGACAGAGTTCGATTTTCAGGAAAGCAGATACCTCAGAGGGCATTTTGTAACATGGATGATGGTGGATGGAGATCAGAGTCCAGAAAGCATTCTGAAATGTTCGAAAAGGAGCTGGTAATGACTTCAGATGAAGCGTCTATGAAAAATTCAATGTTGCCAAAGGGGTATGCATATGTTCCTGCTGATTGCCTGTCAAATGACAAGCAGCAGCTTCAGGACAAGCCATTAGAAAATGAAGGGTAG | 4218 | 0.4305 | MRWWWCTVLLSVMTGERFSRRKKMMGQGEEVGCGAEERPCPASRVPAKLPTESCRLGLKAKEDTGSPGIDFYSQARKALCERSPFDVAVESTSGSVSVTTLPSGLASSLNRHSERRRRPRKSHSGSDKKSSRGGDRSRGNSIWVETEEYFRNLSLPDIDHIFQLSSFSDLATRKCFSIPHLEHRPSTSNADEVVSASEITRNENVDHVKNEDTSMTIDNTGGDFSPSVYKECSSLGWLLGCRNKISLASERPSKKRKLLGCDAGLDKVLIARPCEGDSSLCHYCSTGDSGNKTSDLIVCSTCKVAVHRKCYGVKDGADEPWLCAWCKQNDGAGPVGDSVSTCVLCPKKGGALKPAYKNVEDGGSVKYAHLFCCLWMPEVYIEDLTRMEPIMNISGIKEARRKLVCNVCKVKCGACVRCSNGACRTSFHPICAREAKHRMEVWAKHGNGDVELRAFCSKHTETPDNVILRSGNSLPSGGPDKFGGMGVSMEASDKFDGSDSESQETLLSASKSNAMIMIEGDGRQHISDAVGLVGKSHEDVYPSDSVHFTIVLKKLIDLGKVDVKDVALDVGISPELLIANLSDDCVSPEVRFKIVTWLKNHAYMNTFQRNLRSRVKPVNSHKDEIGDYICDSLAVSGSDIMDPVAVKSVPPRRRTTNKIRLLKDNNLKSSGDAISRDVLHMEDCEADQPVISSPDNMSTRPENSRAPLANNSSDKPCNSSMSERVVEDEAATSMKNSVGGTDLCCLDATATKTAGSAFISTELVTSYIHPYVSEKLMQIQNWAPLESIRHSWKGDPSTVDGVFCDNHDHHSENHGAVTCNDQSNAEQLILARKMKLLESCPEDEVEGEIVYFQHSLISNLAARKQLSDNLICNVVKRLPLEIDATRQQQWDAVLVNQYLSDLKEAKKQGRKERRHKEAQAVLAAATAAAANSSRNSSFRKDALDESAPHENMFKIDASNGRSGVSSQLLPRARETLSRVAVTCNSTEKHSGLGITELDHSREHPRSCDICRRSETINPILICSSCKVAVHLDCYRSVRESIGPWYCELCESVAYRTSGVPAVNFWENPPFIVECGLCGGTTGAFRKTSDGQWVHAFCAEWVFETTFRRGQVHPVEGMETLLRGTGACCICRCKCGVCIKCNYGHCLTIFHPSCARSAGLYMSVRTVNGKLQHKAYCERHSLDQRAKAETQKHGTEELKNIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVTHSMLVHNPFFLTGGSSESATTSLKGHTDDYRSCSDTMQRSDDITVDSSVSAKKRTRVSMNGNQRTDDDCSTSQSSYNRNVIMDRVRFSGKQIPQRAFCNMDDGGWRSESRKHSEMFEKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKQQLQDKPLENEG* | 1406 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g01184 | 1405 | PANTHER | PHD FINGER PROTEINS | 71 | 945 | - | - | |
Pte16g01184 | 1405 | SUPERFAMILY | FYVE/PHD zinc finger | 994 | 1051 | IPR011011 | - | |
Pte16g01184 | 1405 | CDD | ePHD | 1074 | 1179 | - | - | |
Pte16g01184 | 1405 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 339 | 460 | IPR034732 | - | |
Pte16g01184 | 1405 | SMART | PHD_3 | 280 | 327 | IPR001965 | - | |
Pte16g01184 | 1405 | SMART | PHD_3 | 404 | 460 | IPR001965 | - | |
Pte16g01184 | 1405 | SMART | PHD_3 | 1126 | 1180 | IPR001965 | - | |
Pte16g01184 | 1405 | SMART | PHD_3 | 1006 | 1050 | IPR001965 | - | |
Pte16g01184 | 1405 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1071 | 1180 | IPR034732 | - | |
Pte16g01184 | 1405 | MobiDBLite | consensus disorder prediction | 688 | 723 | - | - | |
Pte16g01184 | 1405 | ProSiteProfiles | Zinc finger PHD-type profile. | 1004 | 1052 | IPR019787 | - | |
Pte16g01184 | 1405 | Coils | Coil | 899 | 919 | - | - | |
Pte16g01184 | 1405 | ProSitePatterns | Zinc finger PHD-type signature. | 1007 | 1049 | IPR019786 | - | |
Pte16g01184 | 1405 | MobiDBLite | consensus disorder prediction | 1285 | 1317 | - | - | |
Pte16g01184 | 1405 | ProSitePatterns | Zinc finger PHD-type signature. | 281 | 326 | IPR019786 | - | |
Pte16g01184 | 1405 | MobiDBLite | consensus disorder prediction | 691 | 720 | - | - | |
Pte16g01184 | 1405 | MobiDBLite | consensus disorder prediction | 97 | 139 | - | - | |
Pte16g01184 | 1405 | Pfam | PHD-finger | 293 | 326 | - | - | |
Pte16g01184 | 1405 | Pfam | PHD-finger | 1017 | 1050 | - | - | |
Pte16g01184 | 1405 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 994 | 1053 | IPR013083 | - | |
Pte16g01184 | 1405 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 271 | 331 | IPR013083 | - | |
Pte16g01184 | 1405 | Pfam | PHD-zinc-finger like domain | 341 | 459 | - | - | |
Pte16g01184 | 1405 | Pfam | PHD-zinc-finger like domain | 1073 | 1179 | - | - | |
Pte16g01184 | 1405 | SUPERFAMILY | FYVE/PHD zinc finger | 272 | 332 | IPR011011 | - | |
Pte16g01184 | 1405 | Coils | Coil | 1200 | 1220 | - | - | |
Pte16g01184 | 1405 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 336 | 462 | IPR013083 | - | |
Pte16g01184 | 1405 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1071 | 1182 | IPR013083 | - | |
Pte16g01184 | 1405 | ProSiteProfiles | Zinc finger PHD-type profile. | 278 | 329 | IPR019787 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g01184 | Pte-Chr16 | 31608400 | 31617516 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g01184 | 277 | 461 | C2H2 Transcription Factor Family | AT3G14740 | 31.915 | 2.91e-19 | 89.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Pte16g01184 | zf-HC5HC2H_2 | 1.5e-23 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g01184 | - | - | qsa:O6P43_019709 | 1529.61 |