Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01180 ATGGCAGCTTCTGTACAGAACCGCCAGTACGCTGGGCTTGAACCGCCTATAAACGGCATCATCCGTACCTTAAAATCCGGAGTTCCAAACTACCGGACTGATTACCCGCTTCGTACCTATAACTTGCAGTCAGACCAGGAAATGACCCGGTCTAGGAAACCACAGACGTTGGCTTCGGATATCTATTCCTCCAGTGACGATGACGCAAATGACGTTGATGACTTAAAGCTGTTGATACATAAGGTGAACAGCGAAGTCGAACCGTCCAGCTTAGACTCGAGAGATGAAGAAACAGCCGATAATTGGATCGAGCGTAATGCTTCCATGGTCCGCCTCACTGGGAAGCATCCCTTCAACTCAGAGCCTCCGTTGGCTCGCCTCATGCATTACGGCTTCATCACTCCGGTTCCACTTCACTATGTAAGGAACCATGGTCCAGTCCCAAAAGGTCGTTGGGAGGACTGGACCATTGAGGTCTGTGGACTAGTGAAGCGACCCGCCCGGTTCACTATGGAAGAACTGGTGAATGACTTTCCGAGTCGAGAGTTCCCGGTGACGCTTGTATGTGCCGGAAATAGACGCAGAGAACAGAACATGGTGAAACAGAGCATCGGTTTCAATTGGGGTGCAGCAGCCATTTCTACTTCGGTGTGGAGAGGTGTACCGTTATATCATGTTCTGAAGCGGTGTGGAATTTACAGCAGGAAGGGTGGGGCCCTCAATGTGTGCTTCGAAGGGGCTGAGGATCTGCCAGGTGGTGATGGAACCAAGTATGGTACTAGCATCAAGAGGGAGATAGCCATGGATCCAGCCAGAGACATCATACTGGCGTACATGCAAAACGGAGACCAGTTATCTCCGGATCACGGGTATCCGGTTCGGGTCATCATACCCGGTTTCATCGGTGGCCGTATGATTAAATGGTTGAAGCGTATCATAGTAACCACACCAGAATCCGACAACTATTATCATTATAGAGACAACAGAGTACTTCCCTCCCATGTTGATTCTGAACTCGCTAATGCTGAAGCTTGGTGGTACAAGCCAGAGTATATAATCAACGAACTGAACATAAATTCCGTGATAACGACGCCGAGCCATGAAGAAATTCTGCCGATAACCACGTGGACCAGTCAAAGCACATACACGGTGAAGGGTTACGCTTATTCCGGGGGTGGGAGGAAAGTGACACGTGTGGAGATGACAATGGACGGTGGTGAGAGTTGGCACGTGTGCGATCTGGACCATTCGGAGAAGCCAAACAAGTACGGTAAGTACTGGTGCTGGTGCTTCTGGTCTCTTGAGGTTGAAGTGTTGGACCTTCTTGGAGCTAAAGAGATAGCTATTCGCGCTTGGGACGAGGCTCTCAACACTCAGCCAGAGAAGCTCATTTGGAATCTTATGGGTATGATGAACAACTGCTGGTTCAGAGTGAAAACACATGTGTGCAAGCTACAACGTAAAGGTGAGATTGGAATCGTCTTCGAACACCCAACTGTACCTGGAAACCAATCAGGTGGTTGGATGGCGAAGGAAAGACATCTAGAGCAATCATCGGATTCCATACCGATCCTCAAGAAGAGTGTCTCATCACCATTCATGAACACTTCATCCAAGATCTTCTCCATGTCTGAAGTCAAAAAACACTCTACTGCAGACTCTGCTTGGATTGTTGTCCATGGCCATGTCTATGACTGCACACGTTTTCTCAAGAACCACCCGGGTGGCGCAGATAGCATCCTCATCAACGCTGGAACCGATTGCACTGAAGAATTCGAGGCCATTCACTCTGACAAAGCAAAAAAAATGCTCGAAGATTATCGAATCGGAGAGCTTATCAGCAATGGCTATACCTCGGATTCAAACACTTCCTCTCCAAATATCTCAATGCATGGCCCCATGGTTGCTAGTGCTCCCCACCATTTGACTACCATTGAAGAAGTAACTAAGAAAGTTGCACTGAATCCACGTGAGAAGATCTCTTGCAAGCTTGTCGCCAAGACTACCATTTCTCATGATGTGAGGTTGTTCAGGTTCGCTTTGCCATATGATGACCTAGTCTTGGGTCTACCAGTGGGGAAACACATATTCATGTGTTCCACAATCGATGAAAAACTCTGCATGCGTGCCTATACTCCGACCAGCAGCGATGACGAAGTGGGATACTTCGAATTAGTGGTGAAGATTTACTTGAAAGGTGTACATCCCAAGTTCCCTATTGGCGGACTCATGTCTCAACACCTTGATGCTCTTCCTCTAGGGTCTATGATTGAAGTAAAAGGTCCATTAGGTCACATTGAGTACACTGGTCGCGGTAACTTCCAAGTTCATAGCAAACACAAGTTTGCAAAGAAACTAGCCATGATTGCAGGTGGTACAGGAATCACACCCATCTATCAAGTGGTTCAAGCAATTCTTAAAGACCCGGAAGATCAGACTGAGATGTATGTCGTGTATGCGAATCGAACCGAAGATGATATTCTGCTAAGAGAAGAGCTTGACATGTGGGCAAAGAAGTGTGAGAGATTTAAGGTATGGTATGTGATTGAAAACGCGAAGGAAGGGTGGCAATACAGTGTGGGATTCATTACGGAGACTATCCTGAGGGAGCACTTGCCTGAGGGATCAGAGGACACGTTGGCACTGACTTGTGGGCCACCTCCTATGATTAAGTTTGCAGTACAACCTAATTTAGAAAAAATGAACTATGATATTGCAGAAAGGTTGTTGATATTTTAG 2739 0.4724 MAASVQNRQYAGLEPPINGIIRTLKSGVPNYRTDYPLRTYNLQSDQEMTRSRKPQTLASDIYSSSDDDANDVDDLKLLIHKVNSEVEPSSLDSRDEETADNWIERNASMVRLTGKHPFNSEPPLARLMHYGFITPVPLHYVRNHGPVPKGRWEDWTIEVCGLVKRPARFTMEELVNDFPSREFPVTLVCAGNRRREQNMVKQSIGFNWGAAAISTSVWRGVPLYHVLKRCGIYSRKGGALNVCFEGAEDLPGGDGTKYGTSIKREIAMDPARDIILAYMQNGDQLSPDHGYPVRVIIPGFIGGRMIKWLKRIIVTTPESDNYYHYRDNRVLPSHVDSELANAEAWWYKPEYIINELNINSVITTPSHEEILPITTWTSQSTYTVKGYAYSGGGRKVTRVEMTMDGGESWHVCDLDHSEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAIRAWDEALNTQPEKLIWNLMGMMNNCWFRVKTHVCKLQRKGEIGIVFEHPTVPGNQSGGWMAKERHLEQSSDSIPILKKSVSSPFMNTSSKIFSMSEVKKHSTADSAWIVVHGHVYDCTRFLKNHPGGADSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELISNGYTSDSNTSSPNISMHGPMVASAPHHLTTIEEVTKKVALNPREKISCKLVAKTTISHDVRLFRFALPYDDLVLGLPVGKHIFMCSTIDEKLCMRAYTPTSSDDEVGYFELVVKIYLKGVHPKFPIGGLMSQHLDALPLGSMIEVKGPLGHIEYTGRGNFQVHSKHKFAKKLAMIAGGTGITPIYQVVQAILKDPEDQTEMYVVYANRTEDDILLREELDMWAKKCERFKVWYVIENAKEGWQYSVGFITETILREHLPEGSEDTLALTCGPPPMIKFAVQPNLEKMNYDIAERLLIF* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01180 912 FunFam Nitrate reductase 355 532 - -
Pte16g01180 912 Gene3D - 355 529 - -
Pte16g01180 912 FunFam Nitrate reductase [NADH] 764 912 - -
Pte16g01180 912 Gene3D - 764 906 IPR039261 -
Pte16g01180 912 PIRSF Nitr_rd_NADH 31 911 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pte16g01180 912 PRINTS Cytochrome B5 reductase signature 825 836 - -
Pte16g01180 912 PRINTS Cytochrome B5 reductase signature 880 888 - -
Pte16g01180 912 PRINTS Cytochrome B5 reductase signature 709 716 - -
Pte16g01180 912 PRINTS Cytochrome B5 reductase signature 688 699 - -
Pte16g01180 912 PRINTS Cytochrome B5 reductase signature 754 768 - -
Pte16g01180 912 PRINTS Cytochrome B5 reductase signature 787 806 - -
Pte16g01180 912 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 538 613 IPR001199 -
Pte16g01180 912 FunFam Nitrate reductase 96 345 - -
Pte16g01180 912 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 757 904 IPR039261 -
Pte16g01180 912 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 569 576 IPR018506 GO:0020037
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 813 822 IPR001709 GO:0016491
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 825 836 IPR001709 GO:0016491
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 856 872 IPR001709 GO:0016491
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 787 806 IPR001709 GO:0016491
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 880 888 IPR001709 GO:0016491
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 572 582 IPR001709 GO:0016491
Pte16g01180 912 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 709 716 IPR001709 GO:0016491
Pte16g01180 912 CDD cyt_b5_reduct_like 662 904 - -
Pte16g01180 912 Pfam Cytochrome b5-like Heme/Steroid binding domain 543 612 IPR001199 -
Pte16g01180 912 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 536 618 IPR036400 -
Pte16g01180 912 PRINTS Cytochrome B5 signature 573 587 IPR001199 -
Pte16g01180 912 PRINTS Cytochrome B5 signature 588 595 IPR001199 -
Pte16g01180 912 PRINTS Cytochrome B5 signature 563 573 IPR001199 -
Pte16g01180 912 PRINTS Cytochrome B5 signature 600 612 IPR001199 -
Pte16g01180 912 MobiDBLite consensus disorder prediction 44 65 - -
Pte16g01180 912 SUPERFAMILY E set domains 355 482 IPR014756 -
Pte16g01180 912 Gene3D Translation factors 648 763 - -
Pte16g01180 912 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 93 353 IPR036374 -
Pte16g01180 912 Gene3D - 92 345 IPR036374 -
Pte16g01180 912 FunFam NADH-cytochrome b5 reductase 648 763 - -
Pte16g01180 912 SMART Cyt_b5_2 541 613 IPR001199 -
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 110 124 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 450 462 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 196 208 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 211 226 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 463 476 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 425 435 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 286 299 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 398 410 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 269 285 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 353 365 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 302 315 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 132 148 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 185 196 IPR008335 GO:0016491
Pte16g01180 912 PRINTS Eukaryotic molybdopterin domain signature 384 398 IPR008335 GO:0016491
Pte16g01180 912 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 161 196 IPR022407 GO:0043546
Pte16g01180 912 FunFam Nitrate reductase 534 615 - -
Pte16g01180 912 PANTHER SULFITE REDUCTASE 45 487 - -
Pte16g01180 912 Pfam Oxidoreductase NAD-binding domain 788 894 IPR001433 GO:0016491
Pte16g01180 912 SUPERFAMILY Riboflavin synthase domain-like 651 769 IPR017938 -
Pte16g01180 912 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 657 769 IPR017927 GO:0016491
Pte16g01180 912 Pfam Oxidoreductase molybdopterin binding domain 144 323 IPR000572 -
Pte16g01180 912 Pfam Mo-co oxidoreductase dimerisation domain 351 482 IPR005066 GO:0016491|GO:0030151
Pte16g01180 912 Pfam Oxidoreductase FAD-binding domain 662 768 IPR008333 -
Pte16g01180 912 CDD eukary_NR_Moco 95 480 - -
Pte16g01180 912 Gene3D - 534 615 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01180 Pte-Chr16 31568888 31572626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01180 650 903 NADPH P450 reductases AT5G17770 40.078 3.35e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01180 K10534 - qsa:O6P43_015229 1499.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01180 16 31568888 31572626 Pte16g01180 16 31568888 31572626 RCT