Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01175 ATGGCTCCTCCCTCTTCGACTTCTACTTCTCAAAAATGCCGTTTAGATTGCCAGATGGACGGGAAGGCTAACCTTCCGGTCCGTTCAGACAAGAATCTGGACCGTCCGATCAACCCTGACACCACATCTTCGTCTTCTTCCTCTTTCTCATCGTCCTCTCCCCCTGACTTCCTCCGTCGTGTTCAAGCCGCCGTCAAGCGTCACCGACCTCTAGGTACAATTCAATCAAATAGTATCAGGCCAAGGAGGATGTTGGTTCCACAACGTGAGGCTTCAAGAAGTTGTGTGACAAATTTAGCCCCTGCAGCTGAGTTGAAGTCTCAAGACGCTGTCTCCTTGAGTCAGGCTCACTCAGAGAAATATTCAATTTCACAATCAAAAAGCAGTGCTACTGTTGCTGGAGAAAGTCAAGAGGATGGATTTGCCACACCTCCTTCACTATCAGGTGTGACCATCAGAACTGCTGACCAGGATTTCAACCTTTGTGATGCACATAAATATCATTCCCAGCTCGAAGCTAACTGTAAAGACAAGACTTCTATCACTTCTTTGCAATTAGTGTCTCAACAGGGTGATGGTCAGAAGCAAGTCCAGTTTTCGGCAGGAGGTATTGCTACTTCTCAGGGGGCCGATGTTCGAATGGCCACTGGGTTGGAGAACTTATCTTCTCACTTGAGTTCACTTGCATTAACAGAAATAGACTGGGCTGCGAGCAATCAACTGGAAGCATCAACCATTGCCAATCATGAAATGAAGAACCAAAATTTTCAGAACACAGAAGCAGAGGTAAGTTTTAGATCTGATGGTGGGGTAACTGCTTTGATGCCAAAGAGGCCAACAGCTTTCCAGGATCAGCTGCAACAGTTCAGAAATTTTGGTCAACTACCTATACAGTCTTCTGTTGTTGGGCCATCATGTGCTACAACAACATCTATTTATTCAGCATCAGCACCCGTGCACAATTCAACAACCTGTTTTTCTCATTCACACCGAGATGTTGGTCTTCCAGACACAGTAGAGCAACGCGAGGATCTTGTTGTGAATCCTCATTCTAAAACACAAAGGATTATTCCACAGATGTCTTGTACTTCAATAAAAGATTCTAATAGAATGTCAATTGATCAGACAGCAGTTGAGGTCCGGGGTCCAGAATGTGCTACTGATTCCAGAGTGGAAATTAAAGAATATCACCCATCAAAGGAGCAGAAATGCAGTGTTCTGACAGAAACAGTCCTGCAGCAGCAGAAATCTTCCATTCTTTGTGATAACTCATCTAAAGGGAAAGAATCTGGCAGTAATGCTAACAATCCACAACCTCAGATTCCTCTTTCCAAAAGTACCTCTACAGATGAGAAGTTGGAAACCTCTAAAATGGAAAGGCAAGAGAAGGCTGCAACCAAAAATACAGCAGCTCCACGTAAGAAGAGTTATGATCCTGACTTGTTTTTTAAAGTAAATGGGAAGCTCTATCAAAGGCTCGGAAAGATTGGGAGTGGAGGTAGCAGTGAGGTTCATAAAGTGATTTCATCTGACTGCACAATTTATGCACTTAAAAAGATAAAGCTTAAAGGACGAGATTATGCAACTGCATATGGCTTCTGTCAAGAAATTGAATACCTAAGCAGGTTGAAAGGGAAAGACCACATTATACAGCTTATTGACTATGAGGTGACAGACAAGGCTTTGCTCCAGGAAGTCATGAAAGGGTCCTTGAGTAATAAGGATGGCCGGGTGAAGGACGACGGCTACATATACATGGTTCTAGAATATGGAGAAATTGATTTGGCTCACATGCTGGCGCAGAAGTGGAAGGAATTGGATGGATGCAATCAGACTATAGATGAAAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCAGTCAACACTATACATGAGGAACGAATTGTGCACTCTGACTTGAAGCCAGCTAACTTTCTTCTTGTCAAAGGGTCACTAAAGTTGATTGATTTTGGTATAGCCAAAGCCATAATGAGCGACACAACAAATATTCAACGTGATTCACAGGTAGGGACATTGAGTTACATGTCTCCTGAGGCATTCATGTGCAATGAAAAAGATGCAAATGGAAATGTCATCAAGTGTGGTAGGCCCTCAGATATCTGGTCTCTTGGTTGCATCCTTTACCAAATGGTATATGGAAGAACTCCTTTTTCCGAGTACAAGACATTCTGGGCCAAACTAAAAGTTATAACAGATCCAAACCACAATATTACATATGAACTCGTTTCAAATCCGTGGCTTCTTGATCTTATGAAGAAGTGTCTGGCATGGGACCGTAATGAAAGGTGGAGGATTCCTGAGCTACTTAAGCATCCGTTTCTTGTTCCCCCAGTTCCAACCCAGCTGCCCCAAAACAGTAGCTGTGACCTACTGCAACATCTTGCTGAATCTTGTCGAAATGACACGGCTGCTTCGAAGCTGTGTTGTGAACTCCAGCAGATGTTCTGTTATCCAAAGCAGACATTTCTCTCGTCAGAGTCACAAAACCAGTGGTGTCTGTGGCTTTCGCAAATATCGAAACTAAGTTGTGAGCTCCAAGAGCGTTTAAGAAATTCAGAGAAATAG 2592 0.4329 MAPPSSTSTSQKCRLDCQMDGKANLPVRSDKNLDRPINPDTTSSSSSSFSSSSPPDFLRRVQAAVKRHRPLGTIQSNSIRPRRMLVPQREASRSCVTNLAPAAELKSQDAVSLSQAHSEKYSISQSKSSATVAGESQEDGFATPPSLSGVTIRTADQDFNLCDAHKYHSQLEANCKDKTSITSLQLVSQQGDGQKQVQFSAGGIATSQGADVRMATGLENLSSHLSSLALTEIDWAASNQLEASTIANHEMKNQNFQNTEAEVSFRSDGGVTALMPKRPTAFQDQLQQFRNFGQLPIQSSVVGPSCATTTSIYSASAPVHNSTTCFSHSHRDVGLPDTVEQREDLVVNPHSKTQRIIPQMSCTSIKDSNRMSIDQTAVEVRGPECATDSRVEIKEYHPSKEQKCSVLTETVLQQQKSSILCDNSSKGKESGSNANNPQPQIPLSKSTSTDEKLETSKMERQEKAATKNTAAPRKKSYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLSRLKGKDHIIQLIDYEVTDKALLQEVMKGSLSNKDGRVKDDGYIYMVLEYGEIDLAHMLAQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNEKDANGNVIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKLKVITDPNHNITYELVSNPWLLDLMKKCLAWDRNERWRIPELLKHPFLVPPVPTQLPQNSSCDLLQHLAESCRNDTAASKLCCELQQMFCYPKQTFLSSESQNQWCLWLSQISKLSCELQERLRNSEK* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01175 863 SUPERFAMILY Protein kinase-like (PK-like) 484 793 IPR011009 -
Pte16g01175 863 MobiDBLite consensus disorder prediction 1 15 - -
Pte16g01175 863 FunFam serine/threonine-protein kinase mph1 isoform X1 604 786 - -
Pte16g01175 863 MobiDBLite consensus disorder prediction 1 78 - -
Pte16g01175 863 MobiDBLite consensus disorder prediction 421 452 - -
Pte16g01175 863 Gene3D Phosphorylase Kinase; domain 1 483 570 - -
Pte16g01175 863 PANTHER MIXED LINEAGE PROTEIN KINASE 44 815 - -
Pte16g01175 863 CDD PKc_Mps1 488 783 IPR027084 -
Pte16g01175 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pte16g01175 863 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Pte16g01175 863 Gene3D Transferase(Phosphotransferase) domain 1 605 786 - -
Pte16g01175 863 MobiDBLite consensus disorder prediction 36 57 - -
Pte16g01175 863 ProSiteProfiles Protein kinase domain profile. 490 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01175 863 FunFam serine/threonine-protein kinase mph1 isoform X2 483 570 - -
Pte16g01175 863 MobiDBLite consensus disorder prediction 120 148 - -
Pte16g01175 863 SMART serkin_6 490 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01175 863 Pfam Protein kinase domain 490 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01175 863 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01175 Pte-Chr16 31508607 31514212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01175 496 784 MAP Kinase Kinase Kinase AT4G08470 31.164 6.02e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pte16g01175 Pkinase 1.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01175 K08866 - qsa:O6P43_015223 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01175 16 31508607 31514212 Pte16g01175 16 31508607 31514212 RCT