Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01169 ATGGTGAAGAAAGAGCAGAAGATCAATCCAGAGGCATCAAACCAAGTGAAATCTTCATTAGCACCATCATCATCAGCTTGTAAGAAGAAGTACAAAGGTGTAAGAATGAGAAGCTGGGGTTCATGGGTATCAGAGATAAGAGCACCCAATCAGAAAACAAGAATTTGGTTAGGATCTTACTCAACACCAGAAGCTGCAGCAAGAGCTTATGATGCTGCACTTGTTTGCCTTAAGGGATCTTCAGCAAATCTCAACTTCCCTATCTCTGCAGCTTCACATTATATTCCTAAGGATACTGTCATGTCTCCCAAATCAATTCAAAGAATTGCAGCAGCAGCTGCTGCTAATACTTTTCTTGACAATAATGCCCCAAGTCCATCATCACCTCCTCCTGCCTCAACTTCATCATCGTCCTTATCATTATCATCACCGTCACCATCTGATCAAATTGATGATGGTGTGTCATTCATGTCATCGTTTGACACTTATACTCCTTGTGATCAAGCTGATGAAGCATTTGGTGCGTTGGACTCGTCATGGTACAGCTTTGAGAGTTTACAATCCCCAAAGTACATTGATCAAATGCTTACAGGGGCTTTCTTTGATCCACCCCAGTTCGATGACTTATACGAAGAAAGTGATTTTGCTCTGTGGAGCTTCTGCTGA 666 0.4204 MVKKEQKINPEASNQVKSSLAPSSSACKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALVCLKGSSANLNFPISAASHYIPKDTVMSPKSIQRIAAAAAANTFLDNNAPSPSSPPPASTSSSSLSLSSPSPSDQIDDGVSFMSSFDTYTPCDQADEAFGALDSSWYSFESLQSPKYIDQMLTGAFFDPPQFDDLYEESDFALWSFC* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01169 221 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Pte16g01169 221 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Pte16g01169 221 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pte16g01169 221 MobiDBLite consensus disorder prediction 1 27 - -
Pte16g01169 221 MobiDBLite consensus disorder prediction 120 148 - -
Pte16g01169 221 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Pte16g01169 221 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Pte16g01169 221 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Pte16g01169 221 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pte16g01169 221 FunFam ethylene-responsive transcription factor ERF014-like 29 89 - -
Pte16g01169 221 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Pte16g01169 221 MobiDBLite consensus disorder prediction 8 25 - -
Pte16g01169 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 163 - -
Pte16g01169 221 MobiDBLite consensus disorder prediction 132 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01169 Pte-Chr16 31456298 31457568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01169 31 220 AP2-EREBP Transcription Factor Family AT1G21910 47.716 5.77e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte16g01169 AP2 2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01169 - - qsa:O6P43_015204 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g01169 16 31456298 31457568 Pte16g01169 16 31456298 31457568 RCT