Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01167 ATGGCGAACGTTTCCAATCAACCACCCCTAAACTCAATTCCTGTAGAGCTAGAAAATGAAAATGAGCTTGGCAAATTATCCATCTGTTTGGCCTTCGATATTTCTGCTCTCATGGTTCTGAAATCAGCTGTTGAACTCAACATCTTGGAGATTATTGCAGAAGCTGGGGATGATGCTTCTGTCTCACCCAAACACATTGCCTCTAAGCTTCCCACTAAGAATCCGGATGCCCCCATATTGCTGGACCGGATGCTCAGTCTCCTTGCCTGTCATTCTATACTTAAGTGCTCTACCCGTACAATGGAAGATGGTGATCAACTCCAGCGACTGTACGGACTAGGACCTGTGTCTAAGTTCTTTTTGAAAAATGAAGAAGAAGGATCGATTGGCCCTTTTTTTATTTTGTGTTACGATAAGGTTTTCATGGAAAGTTGGTACCACTTGAATGATGCTATACTAGAAGGAGGAGTCCCTTTTAACAGAGCGTATGGGAATAGTGTATTTGAATATCTAGGAACAGATCCAAGGTTCAATCATGTATTTAACCAGGGCATGTCCAATTTCACTATATTCCTAATGAAGAAGATACTTGATGTATACGACGGGTTTGAAGATGTTAAGGTTTTGGTAGATGTGGGTGGTGGCATTGGAACCAATCTAAACCTCGTCATTTCCAAATATCCCCACATCAGAGGAATCAATTATGATTTGCCTCATGTAATTGCTGTCGCACCAACTTATTCAGGAGTTGAGCATGTAGGAGGAGATATGTTTGCAAATGTTCCACAAGGAGATGCCATCTTCATCAAGTCCATTCTCCATAACTGGAGTGATGATAACTGTTCGAAAATACTCAAGAACTGCTTTGAAGCTCTACCAAACATTGGAAAGGTCGTTATCATGGATATGATTCGTCTCGAGACTCCAACAAGTAACCTTACCTCGAAGATCGTGCACTCGTTAGATCTTTATATGTCAGCTCAACTTCATGGGGGCAGGGAAAGGACTGAAAAAGATTTCAAGGAACTGGCTTTGAAATCTGGATTTTCGAGATATGAAGTCAAATGTTGTGTTTACAATTATGGGATAATAGAATTCCACAAAATGATGGATCAATGA 1119 0.4075 MANVSNQPPLNSIPVELENENELGKLSICLAFDISALMVLKSAVELNILEIIAEAGDDASVSPKHIASKLPTKNPDAPILLDRMLSLLACHSILKCSTRTMEDGDQLQRLYGLGPVSKFFLKNEEEGSIGPFFILCYDKVFMESWYHLNDAILEGGVPFNRAYGNSVFEYLGTDPRFNHVFNQGMSNFTIFLMKKILDVYDGFEDVKVLVDVGGGIGTNLNLVISKYPHIRGINYDLPHVIAVAPTYSGVEHVGGDMFANVPQGDAIFIKSILHNWSDDNCSKILKNCFEALPNIGKVVIMDMIRLETPTSNLTSKIVHSLDLYMSAQLHGGRERTEKDFKELALKSGFSRYEVKCCVYNYGIIEFHKMMDQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01167 372 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983
Pte16g01167 372 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Pte16g01167 372 PIRSF O-mtase 10 368 IPR016461 GO:0008168
Pte16g01167 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 368 IPR016461 GO:0008168
Pte16g01167 372 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Pte16g01167 372 Gene3D - 11 120 IPR036388 -
Pte16g01167 372 FunFam Caffeic acid O-methyltransferase 121 368 - -
Pte16g01167 372 SUPERFAMILY "Winged helix" DNA-binding domain 29 124 IPR036390 -
Pte16g01167 372 FunFam Caffeic acid 3-O-methyltransferase 7 120 - -
Pte16g01167 372 PANTHER O-METHYLTRANSFERASE 37 353 IPR016461 GO:0008168
Pte16g01167 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 366 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01167 Pte-Chr16 31397784 31399281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01167 14 370 Monolignol Biosynthesis Gene Families AT5G54160 54.342 3.70e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01167 K13066 - qsu:111986891 469.929