Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01157 ATGGATGCTTCAAGTAAACCAAGCCAAAATCCAAGGGCTCAAGAACAAGAAAATCAAGATGATGAGCTTTGTAAATTGGCCATCCGGTTGTCCTGCAATGTCACACTTCATATGGTTCTCAGATCAGCAATAGAACTCAACATCTTGGAGATTATCGCAGAAAACGATGAATCTGGCGGCTTTCTCTCAGCTGAGAACATTGCAGCTAAGCTTCCCACAAAGAATGCGGAGGCCCCCATATTGCTAGACCGGATGCTTAGCCTTCTTGCCAGCCATTCTATTCTTGCGTGCTCTATTCGGACACAGGAAGATGGTGAAGCTCAGCAATTGTATGGGTTGGGACCTATATCCAAATTCTATCTGAAGAATGAAGATGAAGGATCTATTGGTGCTTTCCTTCTTCAGAACCATCATAAGATCTTTATGGAGAGTTGGAACCACTTGAATGATGCTATACTAGCGGGAGGATTCCCTTTTGAAAGGGCACACGGGATGAATGTATTTGAATATCTAGGAAGGAATCCAAGCTTCAATGAAGTATTCAACCAGGCCATGTCAAATTTCACTACTTTAGTAATGAAGAAGATACTTGATGTATACAAAGGGCTTGATGATGTTAACGTGTTGGTAGATGTGGGTGGTGGAACTGGGGTCAATCTCAATCTCATTACTTCTAAGTTTCTTCACATCAAAGGAATCAATTACGATTTGCCTCATGTAATTGCAGCTGCACCATCTTATTCAGGGGTGGAGCATGTAGGAGGAGATATGTTTGTAAATGTTCCAAGAGCAGATGCCATTTTCATGAAGTGGATTCTCCATGACTGGAGTGACGATCATTGTTTGAAACTGCTCAAGAACTGCTATGAAGCTCTTCCGAACTCAGGAAAAGTCATAATTGTGGAATCCATTCTTTCTGAAACTCCAGACAACAGTGTTGCAGCCAACATTGGGCATTTGCTAGATGTTGCTATGCTAGCTCAAACTCCTGGGGGCAAGGAAAGAACTCTAAAGAATTTCAATACTTTGGCTACGAAATCTGGATTCTCAAGCTGTGAAGTCATATGTACAGCTTACCACTTTTGGGTGATGGAATTTCACAAGAAGGAGAATCCATGA 1119 0.4191 MDASSKPSQNPRAQEQENQDDELCKLAIRLSCNVTLHMVLRSAIELNILEIIAENDESGGFLSAENIAAKLPTKNAEAPILLDRMLSLLASHSILACSIRTQEDGEAQQLYGLGPISKFYLKNEDEGSIGAFLLQNHHKIFMESWNHLNDAILAGGFPFERAHGMNVFEYLGRNPSFNEVFNQAMSNFTTLVMKKILDVYKGLDDVNVLVDVGGGTGVNLNLITSKFLHIKGINYDLPHVIAAAPSYSGVEHVGGDMFVNVPRADAIFMKWILHDWSDDHCLKLLKNCYEALPNSGKVIIVESILSETPDNSVAANIGHLLDVAMLAQTPGGKERTLKNFNTLATKSGFSSCEVICTAYHFWVMEFHKKENP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01157 372 FunFam Caffeic acid O-methyltransferase 121 368 - -
Pte16g01157 372 Gene3D - 4 120 IPR036388 -
Pte16g01157 372 Pfam Dimerisation domain 38 90 IPR012967 GO:0046983
Pte16g01157 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 366 IPR029063 -
Pte16g01157 372 PIRSF O-mtase 4 368 IPR016461 GO:0008168
Pte16g01157 372 PANTHER O-METHYLTRANSFERASE 32 353 IPR016461 GO:0008168
Pte16g01157 372 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Pte16g01157 372 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Pte16g01157 372 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Pte16g01157 372 CDD AdoMet_MTases 209 301 - -
Pte16g01157 372 SUPERFAMILY "Winged helix" DNA-binding domain 19 125 IPR036390 -
Pte16g01157 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01157 Pte-Chr16 31283178 31285068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01157 20 369 Monolignol Biosynthesis Gene Families AT5G54160 55.429 4.91e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01157 K13066 - tcc:108663133 464.151