Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01154 ATGGAGTTGCCATCTGAATATGTAGAAACTGAAAAGCAGATGGGAGAGGAAGTGGAGCAGCATTTTCATGTGTTGGCTGTGGATGATAGTGTCATAGACAGGAAAGTCTTGGAAACGCTGTTGCAGAAAGTATCTTCATATAGAGTGACTTGTGTGGATTCTGGAGACAAAGCCTTGAAATATCTTGGTCTTCTTGATGACATTGATAATGCTTCTTCGTCTTCTTCTCCTGAGTCCTCAAAACACGAGGGAAGTATAAAAGTGAACCTGATCATGACAGACTACTGTATGCCTGGGATGAGTGGCTATGATTTACTTAAAAGACTCAAGGGATCTTCTTGGAAAGATGTTCCAGTGGTGGTCATGTCATCAGAGAATGTACCTTCCAGAATTAACAAGTGCTTGGAGGGAGGAGCAGAGGAGTTCCTTTTGAAGCCTATTCAGTTATCTGATTTGGAGAAGCTCCAACCCTACCTTTCAAAATGCAATGATCACTCTGACCAGGAGGAAAGCCATAGTTCCACTGCTACAACTATAAATCATGAAGACTCCAAGAATGACAACGAAGACAACAGTTCTAATGATAATAACAGTGGCTGCAGCAAAAGGAAGGCGGTGTCACCAGAACCTGAATCGGAAAGAAGACCTAAAACGAAATAA 660 0.4197 MELPSEYVETEKQMGEEVEQHFHVLAVDDSVIDRKVLETLLQKVSSYRVTCVDSGDKALKYLGLLDDIDNASSSSSPESSKHEGSIKVNLIMTDYCMPGMSGYDLLKRLKGSSWKDVPVVVMSSENVPSRINKCLEGGAEEFLLKPIQLSDLEKLQPYLSKCNDHSDQEESHSSTATTINHEDSKNDNEDNSSNDNNSGCSKRKAVSPEPESERRPKTK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01154 219 MobiDBLite consensus disorder prediction 162 219 - -
Pte16g01154 219 Pfam Response regulator receiver domain 24 154 IPR001789 GO:0000160
Pte16g01154 219 Gene3D - 23 201 - -
Pte16g01154 219 CDD REC_typeA_ARR 24 155 - -
Pte16g01154 219 ProSiteProfiles Response regulatory domain profile. 23 160 IPR001789 GO:0000160
Pte16g01154 219 SMART REC_2 22 156 IPR001789 GO:0000160
Pte16g01154 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 211 IPR045279 GO:0009736
Pte16g01154 219 SUPERFAMILY CheY-like 22 154 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01154 Pte-Chr16 31262098 31264165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01154 14 161 Response Regulator Gene Family AT3G57040 58.389 3.11e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte16g01154 Response_reg 7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01154 K14492 - zju:107406325 258.07