Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01153 ATGAAATATGGCAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCAGAGGAAGGGAGACTTCCTGATGCTGGCCCTCCCTCACCTACTGATCATTTACGAGAGATTTTCTACAGAATGGGATTGAATGACAAGGAAATTGTCGCTTTATCTGGTGCACACACGTTAGGAAGATCAAGACCAGAACGCAGTGGTTGGGGCAAACCAGAGACCAAGTATACGAAAGATGGGCCTGGAGCACCCGGAGGTCAATCCTGGACAGTGCAATGGTTGAAGTTTGATAATTCATACTTCAAGGATATCAAAGAACGAAGAGACGAAGATCTATTGGTCCTGCCAACCGATGCTGCTCTTTTTGAAGATCCCTCGTTCAAGGTATATGCTGAAAAATATGCTGAAGATCAGGAGGCTTTCTTCAGGGATTATGCTGAAGCCCATGCCAAACTTAGCAATCTTGGAGCTAAATTTGATCCACCAGAGGGTATTGTCATAGATGAAGCTTCTCCGAAAGGTGAGAAGTTTGAAGCTGCGAAGTACTCGTATGGGAAGAAAGAGCTATCAGCAACCATGAAGGAGAAGATTCGGGCTGAATATGAGGGTTTTGGTGGAAGCCCAGATAAGCCTCTGCCATCAAATTATTTTCTTAACATCATTATTGTGATAGGTGTTTTGGCGATTTTAACATTTTTACTGGGATACTAA 699 0.4421 MKYGRVDVSGPEQCPEEGRLPDAGPPSPTDHLREIFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFRDYAEAHAKLSNLGAKFDPPEGIVIDEASPKGEKFEAAKYSYGKKELSATMKEKIRAEYEGFGGSPDKPLPSNYFLNIIIVIGVLAILTFLLGY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01153 232 FunFam L-ascorbate peroxidase T, chloroplastic 23 146 - -
Pte16g01153 232 Pfam Peroxidase 2 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 MobiDBLite consensus disorder prediction 52 80 - -
Pte16g01153 232 MobiDBLite consensus disorder prediction 1 32 - -
Pte16g01153 232 ProSitePatterns Peroxidases proximal heme-ligand signature. 45 55 IPR019793 -
Pte16g01153 232 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 156 IPR044831 GO:0004601|GO:0034599
Pte16g01153 232 ProSiteProfiles Plant heme peroxidase family profile. 1 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 PRINTS Plant ascorbate peroxidase signature 39 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 PRINTS Plant ascorbate peroxidase signature 21 38 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 PRINTS Plant ascorbate peroxidase signature 114 138 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 Gene3D Peroxidase, domain 2 21 145 - -
Pte16g01153 232 PRINTS Haem peroxidase superfamily signature 85 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 PRINTS Haem peroxidase superfamily signature 45 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte16g01153 232 Gene3D - 1 152 - -
Pte16g01153 232 SUPERFAMILY Heme-dependent peroxidases 2 161 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01153 Pte-Chr16 31242370 31244887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01153 21 148 Peroxidase AT2G18140 34.211 3.48e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01153 K00434 - atri:130810251 425.631