Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01142 ATGGGCAGCCTAAATCAGCAGCAGCAGGGTATTGACATTGGCAGCAACCGCATAGCAGCTGTCAATGTTACACCACCACACATTACTGGTCCTAATGATCTGCTTACTGATCAAGAGCTGCTGTGGGTGATACTCATTGGACTGATCTTTGCACTCATAATTCAGTCACTAGCTGCTAATCTTGGCGTCACCACTGTGATTGGAACGGCCTTTGCACTGAATATTCTATTCAAGATCCCACTTTGGGTTGGTGTTCTACTCACAGGATTCAGCACTCTCTTGCTTCTTGGCCTGCAGAGATATGGGGTTAGGAAGCTAGAATTGGTTGTTTCGGTACTAGTTTTTATAATGGCGGGATGTTTCTTTGGAGAAATGAGTTATGTGGATCCCCCAGCTTCTGAAGTGTTCAAGGGCATGTTTGTGCCAAAGCTTAAAGGTCAAAGTGCCACCGGTGACGCCATTGCACTTCTTGGTGCCCTCATCATGCCGCATAACCTTTTCCTCCATTCAGCCTTGGTGCTTTCTAGGAAAGTCCCAGATTCAGTTCGTGGCATAAACGACGCATGCAGATATTTCCTGATAGAGAGTGGAATGGCACTTTTTGTAGCATTTTTAATCAACGTTTCAATGATCTCCGTTACCGGCACGATTTGCTATGCCAACAATCTTTCAACTGAAAATGCAAACAGATGCAGCGATCTAACTCTGGATTCTGCTTCTTTCCTCTTAGAGAATGTGTTAGGAAAATCTGCAAAGTACTTTTATGCTATAGCACTACTAGCCTCGGGGCAAAGCTCTGCTATCACGGGCACATATGCTGGGCAATACATCATGCAGGGCTTCCTGGACCTTAGGATGAAGAAATGGCAAAGGAACTTGATGACTAGAACCATAGCCATTGCGCCGAGTCTCGTCGTATCCATTATCGGAGGATCTTCGGGATCTGGGAGGCTCATTGTTATTGCATCGATGATACTTTCTTTTGAACTTCCCTTTTCTCTGATTCCACTCCTTAAATTCAGCAGCAGTAGTAGCAAAATGGGACCTCACAGGAATTCTATAATTATCATTATCATCTCGTGGATACTAGGCTTTGGAATCATTGGCATTAATGTTTACTACCTTAGTACTGCCTTTGTGGATTGGCTAATGCACAATACTCTTCCCAAGGTTGCCAATGTGTTTATCAGCATAGTAGTTTTTCCTTTGATGGCAATATATGCATTTTCAGTCATATACTTGACGTTAAGAAAAGACAAGGCCGTTACATACGTTGATCCAATCCAAACTCAAATGGAAAAGGGACTTGCTGGTTCAGGGAGAAATACTGAAATGGCTCATGTACCTTACAGAGAGGACTTAGCTGATATCCCATTGCCCGAATGA 1386 0.4365 MGSLNQQQQGIDIGSNRIAAVNVTPPHITGPNDLLTDQELLWVILIGLIFALIIQSLAANLGVTTVIGTAFALNILFKIPLWVGVLLTGFSTLLLLGLQRYGVRKLELVVSVLVFIMAGCFFGEMSYVDPPASEVFKGMFVPKLKGQSATGDAIALLGALIMPHNLFLHSALVLSRKVPDSVRGINDACRYFLIESGMALFVAFLINVSMISVTGTICYANNLSTENANRCSDLTLDSASFLLENVLGKSAKYFYAIALLASGQSSAITGTYAGQYIMQGFLDLRMKKWQRNLMTRTIAIAPSLVVSIIGGSSGSGRLIVIASMILSFELPFSLIPLLKFSSSSSKMGPHRNSIIIIIISWILGFGIIGINVYYLSTAFVDWLMHNTLPKVANVFISIVVFPLMAIYAFSVIYLTLRKDKAVTYVDPIQTQMEKGLAGSGRNTEMAHVPYREDLADIPLPE* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01142 461 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 64 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 153 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 263 282 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 78 97 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 323 342 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 291 308 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 103 124 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 PRINTS Natural resistance-associated macrophage protein signature 50 76 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 Pfam Natural resistance-associated macrophage protein 64 353 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte16g01142 461 NCBIfam Nramp family divalent metal transporter 46 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01142 Pte-Chr16 31092293 31095542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01142 39 461 Inorganic Solute Cotransporters AT1G15960 54.447 1.15e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01142 K21398 - gmx:100787785 630.557